| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1029 |
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| Symbol | |
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| ID | 5456566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1128427 |
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| End bp | 1129926 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876599 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412308 |
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| Protein GI | 154251484 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGAATG ACTTTCTGAA ATCCAGTGCT CAAGCATCGC CGATGCCCAT CGGCGAACTG
CTGGCTTATC ATGCGGCCAG GCACTCGGCG CGACCGGCGG TAACATTCAA TGGCGTGACC
ACGAGTTATG CGGAGCTTGA CGCGCGCTCC AATCGCAAGG CGCGCCAGCT CGCAGAACGA
GGCGTGGGGG CAGGCGATAT CGTGACCATG TCCGTGCCGA ACAGTCTTGA GTTTTACGAG
ACTGTGTTTG CGGTCTGGAA GTTGGGCGCC GTACCAAATC TTGTTTCTTC GAAATTGCCG
GCCACCGAGT TGCAGGCGAT CATCGAACTC GCCAAGCCGC GCCTTGTGAT CAGCGAAGAA
AGTGCGCGGG TCGAAGGGTG GAATTTTATC GCTGTGGGCA TGACTCCAAG CACCGACCTG
TCCGCCGATC CGCTTCCGAC GAAAATCTCA CCTATCTGGA AAATTGGAAC AAGCGGCGGA
TCTACCGGGC GACCAAAACT GATCGTGGAC AGGCAAAAGA GCGTCTTTGA TCCGAACAAG
GCTCCTATGG ATCAGAAGCT CGGCGACACG ATGCTCAACC CGGGCCCCCT CTACCACAAC
ACGCCGTTTC TGACGTCTAC CCAATGCCTT TTCTCCGGTG GGCATGTCGT CGAAATGGGA
CGGTTCGATC CTTTGCGCGC GCTCGAACTG ATCGAACGCT ACAAGGTCAA CTGGATGAGC
CTCGTTCCGA CAATGATGAG CCGGATCTGG CGTCTGCCTA CCGAGCAACG CGAAGCCTTC
GATCTGTCGA GCGTTCGAAG CGTATGGCAT ATGGCCTCGG TCTGTCCGGT GTGGCTGAAG
CAGGCATGGA TCGATTGGCT TGGACCAGAT CGGATCTTCG AAGTCTATGG CGGTACCGAA
TTGATGGGCT TCACCATGAT CACCGGGCGA GAGTGGCTCT CGCACAAGGG TTCGGTTGGC
AAGACCCCCC CTGGCTATCA CATGCGCATA TTGGACGAAA AGGGCAACGT GTGCGCCCCG
GGCGAGGTCG GCGAGATATA CTTCCTGCCG CCGAACGGTC CGAATTCGAC ATATGAGTAT
ATCGGAGCGC AGGTCAAAGC GGTGGATGGT TGGCAGACCT ACGGCGACCT TGGTCATGTG
GACGAGGAAG GCTACCTCTA TATTGCCGAC CGTCGGACCG ACATGATCGT CTCCGGCGGC
GCCAACATCT TTCCAGCCGA GGTGGAAGCT GCTGTAGACC AGCACCCCGA TGTGCAGTCC
TCTATCGTTA TAGGCCTACC CGATGCCGAC CTGGGACAGC GCGCACATGC CATCGTGCAG
TTGGCGGAAG GTGCTTCCGA AATCATTGAT GACGATACTC TGCGGGCGTT TCTGTCCGGG
AGGCTGGCGC GATACAAGAT CCCTCGCACC TTCGAGTTCA CCAGCGAGAA CTTGCGTGAC
GATGCGGGCA AGGCACGCCG ATCACAACTG AGGGAAGATC GGGTGACAGA TGCCTCGTAG
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| Protein sequence | MANDFLKSSA QASPMPIGEL LAYHAARHSA RPAVTFNGVT TSYAELDARS NRKARQLAER
GVGAGDIVTM SVPNSLEFYE TVFAVWKLGA VPNLVSSKLP ATELQAIIEL AKPRLVISEE
SARVEGWNFI AVGMTPSTDL SADPLPTKIS PIWKIGTSGG STGRPKLIVD RQKSVFDPNK
APMDQKLGDT MLNPGPLYHN TPFLTSTQCL FSGGHVVEMG RFDPLRALEL IERYKVNWMS
LVPTMMSRIW RLPTEQREAF DLSSVRSVWH MASVCPVWLK QAWIDWLGPD RIFEVYGGTE
LMGFTMITGR EWLSHKGSVG KTPPGYHMRI LDEKGNVCAP GEVGEIYFLP PNGPNSTYEY
IGAQVKAVDG WQTYGDLGHV DEEGYLYIAD RRTDMIVSGG ANIFPAEVEA AVDQHPDVQS
SIVIGLPDAD LGQRAHAIVQ LAEGASEIID DDTLRAFLSG RLARYKIPRT FEFTSENLRD
DAGKARRSQL REDRVTDAS
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