Gene Plav_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0909 
Symbol 
ID5456179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp979466 
End bp979783 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content69% 
IMG OID640876480 
Productphage head-tail adaptor, putative 
Protein accessionYP_001412189 
Protein GI154251365 
COG category[R] General function prediction only 
COG ID[COG5614] Bacteriophage head-tail adaptor 
TIGRFAM ID[TIGR01563] phage head-tail adaptor, putative, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.824958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCG CCCTCCGCGA ACGCGTGACC CTGCAATCTC CCATCCGCAC AGCCGACGGC 
GCGGGCGGCG CGGCGGTGAC GTGGGATGAC GGCGTCAGCA TCTGGGCGAA GGTCGAGATG
CGCGGCGGCG GCGAGACGCC AGCGGGCGAA CGGCTGGAAG CACGCGCGCT GGTACGCATG
ACGATCCGCT ATCGCTCCGG CATCACGGCT GAAATGCGTG CCTTGTGGCA GGGCCGCGCC
TTCAACATCC GAAACCTGCG GGACGCGGAC GGGCGGCGGC GCTTTCTCGT GCTCGATTGC
GAGGAGGAAC GGCCATGA
 
Protein sequence
MIGALRERVT LQSPIRTADG AGGAAVTWDD GVSIWAKVEM RGGGETPAGE RLEARALVRM 
TIRYRSGITA EMRALWQGRA FNIRNLRDAD GRRRFLVLDC EEERP