Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0800 |
Symbol | |
ID | 5455844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 865865 |
End bp | 866614 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876369 |
Product | hypothetical protein |
Protein accession | YP_001412080 |
Protein GI | 154251256 |
COG category | [S] Function unknown |
COG ID | [COG4446] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.376791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.485007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGC AGAGTTCGCG GCTTGCCGCG TTTGGCTTGA GGACCGGCAT ACTCGCGCTG ATCCTTCTGG CGCTTTGTAT TATCGGCAAC CGGTTCGAGC TGGTGCATTT CGGCCTCGCC GTGCGCGGCC TGGCATTCGC GGCGCTGATC GGCCTCATCG CGGCGCTTCT CTCGGCCGCG GGCCTTGTCC GCACGCTGGT TTCAAACCGG CGCGGCACGC GGACGGCGAT TGCCGGCCTG GTGCTCGGCC TGCTCGTCGC CGCGCCTGTC GGACAGGCGA TCATCGCCGG CTCGAAAGTG CCGCGCATTC ACGACATCAC GACCGATCTC GACAACCCGC CCGCCTTCTC GGCGGCAACG ATTGCGGCAC GCGGCGAGGC ATCGAACCCG CTTGACCGGG CTGCGCCCGC CGACCTCGCG GAGCAACAGC GCGCGGCCTA TCCCGATGTC GATACGCTGA CAGTGGACCG GCAGCCGGGC AAGGTCTACG AGGCCGCGCT CGAAACGGCG CGCGACATGG GCTGGGAAAT CCTGGCCTCG ACGCCGGAAA CGGGAACCAT CGAGGCGACG GCGACGACGC GGGTGATGAA CTTCCGCGAC GATATTGCGA TCCGCGTCAC GGAAGCCGGA GAGGGCGCCC ATGTGGATGT GCGCTCGGTC TCGCGCGTCG GCGAAAGCGA CCTCGGCGCG AATGCGAACC GTATACGGAC TTATCTGCAT GTGTTGAGGC AGAAGCTGGC GCAAGACTGA
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Protein sequence | MDQQSSRLAA FGLRTGILAL ILLALCIIGN RFELVHFGLA VRGLAFAALI GLIAALLSAA GLVRTLVSNR RGTRTAIAGL VLGLLVAAPV GQAIIAGSKV PRIHDITTDL DNPPAFSAAT IAARGEASNP LDRAAPADLA EQQRAAYPDV DTLTVDRQPG KVYEAALETA RDMGWEILAS TPETGTIEAT ATTRVMNFRD DIAIRVTEAG EGAHVDVRSV SRVGESDLGA NANRIRTYLH VLRQKLAQD
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