| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0778 |
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| Symbol | |
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| ID | 5454175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 844229 |
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| End bp | 845158 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876347 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001412058 |
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| Protein GI | 154251234 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.132224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC TTCTCGTCAC CCATTCCGCC TGTCTCGAAC ACGAAACCCC GCCGGGCCAT
CCCGAATGCG TGGCGCGGTT GCGTGCCGTG CTCGGCGCGC TCGAGACCGA GGATTTCGCG
CTGTTGCAGC GCGCAGAGGC GCCGCGCGCC AGCCACGAGC AGATCGCGCG CGTTCATCCG
ATGAGCCATA TCGAGCGCAT CGAATCCTGC GTGCCTGAAA GCGGTTTCCG CCGCATAGAT
GCCGACACGG CGATGTCTCC GGGTTCCGCG GAGGCGGCTT TCCGCGCCGC CGGCGCCGTC
GTCTATGCCG TCGACGAGGT CATGTCGGGC CGGGCCCGCA ACGGTTTCTG TGCCATTCGC
CCGCCGGGGC ACCACGCGGA ACCCGAAACT TCAATGGGCT TCTGCCTGTT CAACAACATT
GCCATCGGCG CTCTTCATGC GCGCGAGGCG CATGGCTGCA AGCGTGTCGC CGTCATCGAT
TTCGACGTGC ATCACGGCAA CGGTACGCAG GCCGCCTTTG AAACGAACCC GGACCTCTTC
TACGCCTCCA CCCATCAATG GCCGCTTTAT CCTGGCACGG GCAGGGCAGG AGAATTTGGC
TTGGGCAATA TCCTGAACCG TTGCCTGCAG CCTGGCGCCG GCTCGGCCGA GTTCCGCGCG
GCGATTTCGG ATGCGGTTAT CCCCGCCCTG GAACAATTTC GCCCGGATTT CATCTTCATT
TCGGCGGGTT TCGATGCACA TATCTCGGAC CCGCTCGCAA ATCTGCGGCT CACCGACGAA
GACTATGGCT GGGTCACGGC CGAGCTCGTG AAGACGGCGG ACCGTCTCTG CGGCGGTCGC
GTTGTCTCCG CGCTTGAGGG GGGGTATGAC TTGGAGGCGC TGGCGTCGAG TTCGCGCGCG
CATGTGAAGG CGCTGATGCT CGCCGCCTGA
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| Protein sequence | MTTLLVTHSA CLEHETPPGH PECVARLRAV LGALETEDFA LLQRAEAPRA SHEQIARVHP
MSHIERIESC VPESGFRRID ADTAMSPGSA EAAFRAAGAV VYAVDEVMSG RARNGFCAIR
PPGHHAEPET SMGFCLFNNI AIGALHAREA HGCKRVAVID FDVHHGNGTQ AAFETNPDLF
YASTHQWPLY PGTGRAGEFG LGNILNRCLQ PGAGSAEFRA AISDAVIPAL EQFRPDFIFI
SAGFDAHISD PLANLRLTDE DYGWVTAELV KTADRLCGGR VVSALEGGYD LEALASSSRA
HVKALMLAA
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