Gene Plav_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0557 
Symbol 
ID5456685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp610115 
End bp610780 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID640876126 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001411837 
Protein GI154251013 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CAATCTATGG GCCGAGCCTT TCACCTTTCG TTCGCAAGGT GCGCGTGTTC 
CTCGCTGAAA AGGGGCAGGA TTACACGCTG GAGCAGGTGA ATATTTTTCC GGCGCCGGAC
TGGTTCGTCG AAATCTCGCC GCTGAAGCGC GTGCCCGTAT TGAGGGACGA CAGCATCGGG
CCCGATGCGA CGCTGCCCGA TTCCTCCGCC ATCTGCGGTT ATCTGGAAAA GAAGTTTGCC
GCGCCCGCGC TCTATCCCGC CGACGCCTTC GCCTGCGGCA AGGCGCTCTG GTATGAGGAA
TATGCAGACT CCGACCTCGC CGGGAATATC GGCATGGGCG TCTTTCGTCC GATGATCGTG
AGCCGCATGA TGGGCAAGGA GCCTGACACG GCCGCTGCCG AAAAGACGAT GAGCGAAAAG
CTTCCGCGCA ATTTCGCTTT TTTCGAAAAG GAAATCGGAA CAAGGGAATT CCTCTGCGGC
GACACCTTCG GCATTGCGGA TATTTCCGTT GCGACGCAAT TCGCGAACCT CGCCCATACA
GGGCTCAAGC CGGATGCCAA GGCCTACCCG AACCTCACCC GATACCTCGC GGGCATTCAT
GGCCGCCCGA GCTTTGCGGC CTGCATCGCC GAAGAAGCGG ACCTGCTCAG GAAGTTCGGC
CTCTGA
 
Protein sequence
MTLTIYGPSL SPFVRKVRVF LAEKGQDYTL EQVNIFPAPD WFVEISPLKR VPVLRDDSIG 
PDATLPDSSA ICGYLEKKFA APALYPADAF ACGKALWYEE YADSDLAGNI GMGVFRPMIV
SRMMGKEPDT AAAEKTMSEK LPRNFAFFEK EIGTREFLCG DTFGIADISV ATQFANLAHT
GLKPDAKAYP NLTRYLAGIH GRPSFAACIA EEADLLRKFG L