| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0252 |
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| Symbol | |
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| ID | 5453380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 273820 |
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| End bp | 274701 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640875815 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_001411532 |
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| Protein GI | 154250708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.396443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAG ACGCTGCCCC TCAAAATCCT GCGAATAATA CCATCGCGTT TCAGGGCGAG
CCCGGGGCGA ATTCACATAT TGCTTGCCGC GAAGCCTTTC CCGAAATGGT GGGACTTCCT
TGCGCGACAT TTGAGGATGC GGTGCTCGCT GTGCAGGAAG GCCGCGCACT CTACGCGCTC
TTGCCGATCG AGAATTCGCT CGCGGGCCGC ATTGGCGATA TTCATCACCT GCTGCCGGAG
TCGGGACTTT ATATCGTCGG CGAGCATTTC TTGCGCATCC GCTTTCATCT GCTGGGTGTG
AAAGGCGCAA AAATCGAGGG CCTGAAAAGC GTGCAGAGCC AGCCGCCCGC GCTTGGCCAG
TGCCGCAAGA TTATTCGCGA ACTGGGCCTC GTCATGGTCG CGGGTGCGGA TACCGCCGGC
TCCGCGCGTC AGGTGGCCGA AGCCGGCGAT CCCTCCCGTG CCGCAATCGC AACCGAACTC
GCCGCCGAGA TATACGGCCT CGATATTATC CGTCGCGACA TCGAGGACGA GACCCACAAC
ACGACCCGGT TCCTCATCAT GGCGCGCGAG CCGAACGACG CGGAGCCTGA GGACGAACCC
GTCGTTACCA GTTTCATATT CCGTGTGCGG AACGTTCCGG CGGCGCTCTA CAAGGCATTG
GGCGGCTTCG CCACCAACGG CGTGAACATC ACCAAGCTCG AAAGCTACCA GCTTGAGGGC
ACGTTCAATG CCAGCCAGTT CTATGCCGAT ATAGAAGGGC ATCCGGCATC CCGGCATGTC
AGGCTTGCTC TCGAGGAGCT CGAATTCTTT ACGAACGAGC TGCGGATTCT GGGCGTTTAC
AAGGCCCATA CCTACAGGAC GGCGCTGTCC GCAGGCGGCT GA
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| Protein sequence | MAKDAAPQNP ANNTIAFQGE PGANSHIACR EAFPEMVGLP CATFEDAVLA VQEGRALYAL
LPIENSLAGR IGDIHHLLPE SGLYIVGEHF LRIRFHLLGV KGAKIEGLKS VQSQPPALGQ
CRKIIRELGL VMVAGADTAG SARQVAEAGD PSRAAIATEL AAEIYGLDII RRDIEDETHN
TTRFLIMARE PNDAEPEDEP VVTSFIFRVR NVPAALYKAL GGFATNGVNI TKLESYQLEG
TFNASQFYAD IEGHPASRHV RLALEELEFF TNELRILGVY KAHTYRTALS AGG
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