Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1837 |
Symbol | |
ID | 4617832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1666666 |
End bp | 1667994 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639784921 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_931328 |
Protein GI | 119873321 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.409643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000186783 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACATAA GCTTCCTAAG GAGGGAATTT GGCGACCGGT TTATAGAAGA TAAAGTTGTC GCATCTCTAT ATATCCGCGA CGCCTCGTTT ATAGAGGTTT CTCAGTCTAT CATAGGGGTT GTATTTCCAG AAGACGAAGA GGAGGTTGTA GAGCTAGTTC GTTGGGCAGT GAGAAATAAG ACCCCATTAT TTCCACAGGG ATGCGCCACA AGTCTCTCTG GCAACGCCAT TGCGACAACA CCCGGGCTGG TGGTCAGCTT CGAAAGGATG GCCAAGGTGG AGATAGACCC CATAGACGGC GTGGCTGTGG CGGGGCCGGG GGTCAAGCTA GAGGAGCTTA ATATAGAACT GGCTAGACAC GGCCTCTTCT TCCCAGTAGA CCCCGGCTCT GTCAAAAGCG CTACAGTAGG CGGGGCGATA GCTAACGGCG CAGGCGGTAT GAGAGGCGCA AAATACGGCA CTATGAAAGA CTGGGTGTTA GGCCTAAGGG TGGTGACGGG GCGGGGAGAT ACACTTAAGT TGGGCTGCCG GACGTATAAA TGTAGAAATG GATACGACTT AGTTAGACTA TTTGTGGGGA GCGAGGGGAC TCTGGGCTTA GTCACAGAGG CTACTCTCAA GCTAGCCCCC ATCCCCGAGT CAGCTACGGC AGTACTGGCG TATTACAACG ACGTAGAAAC CCTAGTTGAA GACGTGGTAA AAGTCAGAGC CAACAGGGTG TGGCCCCTAT TTGCCGAGTT TCTCGACGCG CCTACCTCTG CCCTAGTTGG GCTGGAAGAG AAAAACGCCC TTTTCCTCGG CGTTGATGTA AACACAGGCG CCGAGGAGAG ACTACTTAAA AAACTGAGAG AGCTTATCAG AGGCGAGATA GCACAGGAAG CCGCGGGGTG GGAAGCCGCC ATGAAACTCC TAGAGCCAAG ACGTAAGCTT TTCTATGGCC AGATAACAGC CGCAAGAGGG GGCGTGTTGG TGATAGAAGA CATAGCTGTC CCCATCTCGA AACTACCTGA CGCAGTCCGG GGCCTTAAGG CCGTTGCCGC CAAACACGGC GTCCCCCTCC TTCTCGGCGG ACATGTGGGA GACGGCAATT TACACCCAGC CACTTGGTAT AGGAGAGAGG AGGGCCCGGC GAAGGTGGAG AAGTTTATAA AAGACATGGC AGAGCTTGTG GCTAAGCTAA ATGGCACAAT CTCTGCAGAA CATGGCGTGG GGATCCTAAA GAAAGAGCTG GCGAGGGCTG AGCTAGGGGA GACAACGTTG AGCTATATGA GAGAGCTCAA AAAGCTCTTC GACCCGTACA ATATCTTAAA CCCAGGCAAG ATCTTCTAG
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Protein sequence | MDISFLRREF GDRFIEDKVV ASLYIRDASF IEVSQSIIGV VFPEDEEEVV ELVRWAVRNK TPLFPQGCAT SLSGNAIATT PGLVVSFERM AKVEIDPIDG VAVAGPGVKL EELNIELARH GLFFPVDPGS VKSATVGGAI ANGAGGMRGA KYGTMKDWVL GLRVVTGRGD TLKLGCRTYK CRNGYDLVRL FVGSEGTLGL VTEATLKLAP IPESATAVLA YYNDVETLVE DVVKVRANRV WPLFAEFLDA PTSALVGLEE KNALFLGVDV NTGAEERLLK KLRELIRGEI AQEAAGWEAA MKLLEPRRKL FYGQITAARG GVLVIEDIAV PISKLPDAVR GLKAVAAKHG VPLLLGGHVG DGNLHPATWY RREEGPAKVE KFIKDMAELV AKLNGTISAE HGVGILKKEL ARAELGETTL SYMRELKKLF DPYNILNPGK IF
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