Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1663 |
Symbol | |
ID | 4617414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1511106 |
End bp | 1511588 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639784746 |
Product | ribosomal protein L13 |
Protein accession | YP_931158 |
Protein GI | 119873151 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4352] Ribosomal protein L13E |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.129766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00645105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATAG TGCCTAAGCC GCTTGTTAAA ATGCCAAGCA GGATAAATGC CGGAGGTATC ACCAAGTGGA GAGTAGGAAG GGGCTTTTCT ATTGGAGAGT TAAAAGCTGT GGGTCTAAAC ATATACCAAG CGAGAATATT AGGCATACCT GTAGACGAGA GGAGAAGAAC CGAATGGCTG CATAACATAG AAACGCTAAG GAAGTGGCTT ATAGATATAC TTGAGGGGAA AGCCGCACCT CCTGAGCCGA CGTTTCCAAG AACCATCAGA GTAAAACAAA AGCGTGGTAG AGCGTTCAGA GGACTTACAT CTGCAGGTAG GAGATCTCGC GGCCTCATTT CGACAAGATT TAAGGAGACT CATAACTATA AATTCAAGAA GAAGGCCAGG GAGAGGAGAC TTAGAAAAAG ACATGAGGCT ACTAGAGGCC TTGGTAATTT GCTAAGGATT TCAAGAATTA TAAATGAGAA TAAATCTAAG TAA
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Protein sequence | MSIVPKPLVK MPSRINAGGI TKWRVGRGFS IGELKAVGLN IYQARILGIP VDERRRTEWL HNIETLRKWL IDILEGKAAP PEPTFPRTIR VKQKRGRAFR GLTSAGRRSR GLISTRFKET HNYKFKKKAR ERRLRKRHEA TRGLGNLLRI SRIINENKSK
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