Gene Pisl_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1663 
Symbol 
ID4617414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1511106 
End bp1511588 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID639784746 
Productribosomal protein L13 
Protein accessionYP_931158 
Protein GI119873151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4352] Ribosomal protein L13E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.129766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00645105 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATAG TGCCTAAGCC GCTTGTTAAA ATGCCAAGCA GGATAAATGC CGGAGGTATC 
ACCAAGTGGA GAGTAGGAAG GGGCTTTTCT ATTGGAGAGT TAAAAGCTGT GGGTCTAAAC
ATATACCAAG CGAGAATATT AGGCATACCT GTAGACGAGA GGAGAAGAAC CGAATGGCTG
CATAACATAG AAACGCTAAG GAAGTGGCTT ATAGATATAC TTGAGGGGAA AGCCGCACCT
CCTGAGCCGA CGTTTCCAAG AACCATCAGA GTAAAACAAA AGCGTGGTAG AGCGTTCAGA
GGACTTACAT CTGCAGGTAG GAGATCTCGC GGCCTCATTT CGACAAGATT TAAGGAGACT
CATAACTATA AATTCAAGAA GAAGGCCAGG GAGAGGAGAC TTAGAAAAAG ACATGAGGCT
ACTAGAGGCC TTGGTAATTT GCTAAGGATT TCAAGAATTA TAAATGAGAA TAAATCTAAG
TAA
 
Protein sequence
MSIVPKPLVK MPSRINAGGI TKWRVGRGFS IGELKAVGLN IYQARILGIP VDERRRTEWL 
HNIETLRKWL IDILEGKAAP PEPTFPRTIR VKQKRGRAFR GLTSAGRRSR GLISTRFKET
HNYKFKKKAR ERRLRKRHEA TRGLGNLLRI SRIINENKSK