Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1433 |
Symbol | |
ID | 4617317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1300196 |
End bp | 1300816 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639784517 |
Product | nuclease |
Protein accession | YP_930933 |
Protein GI | 119872926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.218416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0340527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAGCT TGTGCCTGTG GCATATCTCG AGCTCCCAAG CGGCTCTCTG TTGGAAATCT ACAGTTCACG TGTGTTTGGG CGGGGAGATC TCAACCTCTC GTCTCACATC ACCTCTTTTT TCAGACCTGG CGATCAATGC GACTGTCGTC GTTGTTGAGA TGCCAGACGT AGATGCGCAA AGAGTTGCCG TGTGGAGAGC AATTGATGGC GATACTGTGG AAACGTCCGT GGGCAGAGTT AGGCTTGTGG GTTACGACGC TTGGGAGTGG GACGAGCCGC ACGGCCCAGA GGCCAGATAT TTCCTCATCG GTTTGTGCGG TGGCACAGAT TACTTAGACG TAGACGACCT AGAGCCGAGA GATAGATATG GGCGTATACT TGGCTACCTC TGGTGTGGCC GCGTCTTTGA GGTCGGCGGC ATCTACTACA CGGCGTATGC CTCTGTACAG AAGGCTTTTC TACTCGTAAG ACCTGACCTC GTGAAGAGAC CGCTCTACAT CCCGCCAGAT GAGCACCCAT ATTGGCGCTG GCTCAAGCAC TTTACCGTCG CCTTTGATCG AGTTGATAGA GAAGACAAAA CAACTCGTCC ACCCCGAGCC ATCAAACTTT TAACCCCCTA A
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Protein sequence | MFSLCLWHIS SSQAALCWKS TVHVCLGGEI STSRLTSPLF SDLAINATVV VVEMPDVDAQ RVAVWRAIDG DTVETSVGRV RLVGYDAWEW DEPHGPEARY FLIGLCGGTD YLDVDDLEPR DRYGRILGYL WCGRVFEVGG IYYTAYASVQ KAFLLVRPDL VKRPLYIPPD EHPYWRWLKH FTVAFDRVDR EDKTTRPPRA IKLLTP
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