| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0552 |
|---|
| Symbol | |
|---|
| ID | 4617147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 510966 |
|---|
| End bp | 511961 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639783642 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_930073 |
|---|
| Protein GI | 119872066 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.00831363 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA TCTATACTGA CAAAGACGCA TCTTTAGAGC CTCTAAAGGG GAAGACTATA
GCAGTAATCG GATATGGCAT ACAAGGCAGG GCACAGGCTT TAAACCTAAG AGACAGCGGG
CTGAAAGTAA TAATTGGTTT AAGAAAGGGG GGCAACTCGT GGAATCTAGC AGTTTCGGAG
GGGTTTGAAG TATACGAAGT TAGTGATGCT GTTGCGCAAG CAGATGTAAT AATGGTGTTG
ATTCCCGATA TGGAACAACC AAAGGTGTGG CAAAACCAGA TAGCACCATT TTTAAAAGAG
GGCGCCGTAG TTGACTTTGC CCACGGCTTT AACATACACT ACGGCCTTAT AAAACCGCCT
AAAAATGTCG ACGTAATAAT GGTTGCACCT AAGGCGCCGG GTAAGGCCGT TAGAGAGGAA
TTTTTGGCAG GAAGAGGGGT GCCTGCGCTT GTAGCAGTAC ACCAAGATTA CAGCGGCGCG
GCTTTGAAAT ATGCGCTTGC TATAGCCAAG GGCATTGGCG CAACCAGGGC AGGAGTTATT
GAAACTACAT TTGCCGAAGA GACGGAAACA GATTTGATAG GCGAACAGAT CGTATTAGTG
GGCGGACTTA TGGAGTTGAT CAAAAAGGGG TTTGAGGTGC TTGTAGAAAT GGGGTATCAA
CCAGAGGTGG CCTATTTCGA GGTTTTAAAC GAGGCCAAAC TCATCATGGA CTTAATATGG
CAAAGAGGTA TCTACGGAAT GTTAAACGGC GTCTCCGACA CCGCTAAATA CGGAGGTTTA
ACAGTGGGGC CTAAAATAAT TGACGAAGAA GTAAAGAAAA AAATGCGGAT CTTTGCACTT
CGTGTAAAAA GCGGCGAATT TGCCAAGGAG TGGGTCGAGG AATATGCAAG AGGTGGTCTC
ACACTAAAAA AGTTGATGGA GTCTGCAAGA ACCCACCCCA TAGAGATAGT AGGCGCCGAG
ATGAGAAAGC TGTTATTTGG ACGGCAGCAA GAGTAG
|
|---|
| Protein sequence | MAKIYTDKDA SLEPLKGKTI AVIGYGIQGR AQALNLRDSG LKVIIGLRKG GNSWNLAVSE
GFEVYEVSDA VAQADVIMVL IPDMEQPKVW QNQIAPFLKE GAVVDFAHGF NIHYGLIKPP
KNVDVIMVAP KAPGKAVREE FLAGRGVPAL VAVHQDYSGA ALKYALAIAK GIGATRAGVI
ETTFAEETET DLIGEQIVLV GGLMELIKKG FEVLVEMGYQ PEVAYFEVLN EAKLIMDLIW
QRGIYGMLNG VSDTAKYGGL TVGPKIIDEE VKKKMRIFAL RVKSGEFAKE WVEEYARGGL
TLKKLMESAR THPIEIVGAE MRKLLFGRQQ E
|
|---|
| |