Gene Pisl_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0466 
SymbolrplP0 
ID4616492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp440417 
End bp441448 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID639783551 
Productacidic ribosomal protein P0 
Protein accessionYP_929987 
Protein GI119871980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.606167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCA TAGGCAAGAG GAGATATGTA AGAACTAAGC CATATCCACG GCGTAAGGTT 
AAAATAGTAG AAGAGGCCAT AGATTTATTA AAACGCTATC AATATATCTT TCTATTTGAC
CTACACGGGC TTTCTGCCAG AATTCTACAC GAATACAGAT ATAGGTTAAG ACCATATGGT
CAGATTAAGA TTATAAAGCC TACGTTATTT AAAATCGCGT TTACTAAAGC CTACGGAGGT
GTGCCAATAG ATATCGCAGA AAAAGTCCGG GGCGAAATAG GCTTCTTTTT CACAAATGCC
AACCCTGCAG AGGTTATTAA AATAATCGCT GAAAATAGCG TTAGAAGAGC CGCCAAGCCT
GGAGACAAAG CGCCTTTTGA TATAGTCGTC CCAGCAGGTC CTACAAACGC ATCGCCAGGC
CCTATAATTT CTAAATTCGG CAAATTGAAA ATCCCCACTA GAGTTCAAGA AGGTAAGATC
TGGATTGTAA AAGATACTGT AGTTGCCAAA GCCGGTCAAG AGATTACGCC AGAAATAGCT
GAGGTTCTCA GAGTAGTTGG GATAGAGCCT ATATTTGAAC AACTAAGGCT TATAGGCGTT
ATTTGGAAGG GCAAGAGATT TGTAGAAATA GCCGAGCTTG CCGTAGACGT CGGTAAGTAC
AAAGAGCTAT TTGAAGCCGC AGCTGTTTAT GCAAAGAATT TAGCGCTTAA CATAGTCTAC
CCAACTAGAG AGGTATTGCA AATAGTTATA CCGGCGGCTC ATATGAGGGC AGTTGCTCTT
GCAGCTAGAC TCGGCGTAGT GACTAGAGAG ACGTTACCAA TGTTATTAAG CAGAGCAATT
GCAGAGGCTA ACTCCTTGGC GGCTTTAGTT GCATCTAAGG CACCGGAACT CGGTCTATCT
GTGTCAACAG TGCCACAACC TACGTCACAA CAACCGATAC AACCTACTGA AACTCCAAAA
GAGAGCGCCG AGGAGAAAAA GGAGGGACCT AGCGAGGAGG AAATCGCGGG ATCTTTGGCG
TCTCTCTTTT AA
 
Protein sequence
MLAIGKRRYV RTKPYPRRKV KIVEEAIDLL KRYQYIFLFD LHGLSARILH EYRYRLRPYG 
QIKIIKPTLF KIAFTKAYGG VPIDIAEKVR GEIGFFFTNA NPAEVIKIIA ENSVRRAAKP
GDKAPFDIVV PAGPTNASPG PIISKFGKLK IPTRVQEGKI WIVKDTVVAK AGQEITPEIA
EVLRVVGIEP IFEQLRLIGV IWKGKRFVEI AELAVDVGKY KELFEAAAVY AKNLALNIVY
PTREVLQIVI PAAHMRAVAL AARLGVVTRE TLPMLLSRAI AEANSLAALV ASKAPELGLS
VSTVPQPTSQ QPIQPTETPK ESAEEKKEGP SEEEIAGSLA SLF