Gene Ping_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3342 
SymbolfecD 
ID4625721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4131597 
End bp4132634 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content46% 
IMG OID639798455 
Productiron(III) dicitrate transport system permease protein FecD 
Protein accessionYP_944628 
Protein GI119946948 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACTA ATTTAACCAC CATCCGCTTA GTATTATTAC TGTTAATGCT GCTGGTTATC 
GCTCTGACTG TCTTAGGGGT GTTACAAGGC CCTGCTGATA TTTCATTAAG TCATATTGGT
ACTATCTTCA AACAGGCTCT GTTTACTGCG CCAGGCAGTG ATATTGCCAA CTGGCAGCAC
AGCGTTATTA TGGATATTCG TTTACCGCGC GTTATTATTG CCCTGTTTGC CGGTGCAAGT
TTAGCGTTAT GCGGACTGGT CATGCAGGGA ATGTTCCGTA ATCCTCTGGC CTCCCCTTCC
GTATTAGGTG TTTCATCGGG TGCCTCATTA GGCGCTGTGA TCGCTATTTA TCTTGGTTTT
TCCCTTATTT CCGCCTGGGC CATTCCACTG TTTGCTTTTA TTGGTGCCGG AGTCTCGTTA
AGCATTGTTT ACCGCGTGGC CTCCAGCAGA GGACAAACGA ATATCGCTAC CCTGCTGCTT
TCAGGCGTTG CCATCAGCGC ACTTAATGTC GCCGCCACCT CATTATTACT GGCTTTATCC
CTGAGTAATT GGGATGTCGC ACGAATGATT ATTTATTGGA CCATGGGCGG ACTTGATGGG
CGCACCTGGG ATCATGTGCT TATTATTCTG CCGATTGTCC TGAGCGGATT TGTATTACTG
CTATTTTATA GCAAACAATT AGATCTATTA TTGTTAGGTG AGCAGCATGC TCTCTCGGTC
GGTGTTGATG TACGCAAAAC GCGCCTCAAT CTTTTAATTA TCAGCAGCGC GATGGTGGGA
GCATCGGTTT CAGTGGTCGG CGGAATCGGC TTTATCGGCT TGGTTGTACC GCATATTTTA
CGTTTATTAT TAGGCCCCGC ACACCGTTAT CTGTTACCCG CCTGTTTATT TGGCGGAGCA
ATTACGCTGC TTGGCGCAGA TCTGTTTTTA AACAGTTTTT TTAGTGAGCA GGCTATTCCA
CTGGGTGTGG TGACGGCTGC GTTAGGAGCA CCTTTCTTTC TATTTCTTTT AATCAAACAA
CGTTTTGTTT TAAGTTAG
 
Protein sequence
MFTNLTTIRL VLLLLMLLVI ALTVLGVLQG PADISLSHIG TIFKQALFTA PGSDIANWQH 
SVIMDIRLPR VIIALFAGAS LALCGLVMQG MFRNPLASPS VLGVSSGASL GAVIAIYLGF
SLISAWAIPL FAFIGAGVSL SIVYRVASSR GQTNIATLLL SGVAISALNV AATSLLLALS
LSNWDVARMI IYWTMGGLDG RTWDHVLIIL PIVLSGFVLL LFYSKQLDLL LLGEQHALSV
GVDVRKTRLN LLIISSAMVG ASVSVVGGIG FIGLVVPHIL RLLLGPAHRY LLPACLFGGA
ITLLGADLFL NSFFSEQAIP LGVVTAALGA PFFLFLLIKQ RFVLS