Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3331 |
Symbol | |
ID | 4625745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4115398 |
End bp | 4116558 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798441 |
Product | ABC-type uncharacterized transport system, periplasmic component |
Protein accession | YP_944617 |
Protein GI | 119946937 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000133768 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATTGTA TTCGAAACGT TCTCTACATT TTTATTTGTG CTCTTATAAG TTTCACCAGC ATAGCGGAGG CAGAAGATAA GTCTTCTTTT AGCACCACCC CTGTATTAAA TGATGGGAAG CATTGGCGTG TTGGCTATTA CGAGGGGGGG GAGTATACCG ATTACCAGAA GGAGTTTACC GCCACTATAA AGGGGTTAAT GAAACTAGGC TGGATTGAGC TGCAAACTAT TCCAGAGCAA CCAGGAGAAC GTACAGACCT TCTCTGGAAA TGGTTGTCAA CACAGATTAA GAGTGATTAT ATCGAGTTTG TTCCGGATGC ATACTATTCA GCTGGTTGGG ATGAAGAGCT CCGTAAGCAA AGTGCTGCAG CAGTGATTGA TCGACTCAAG AATAAGCCGG ATATTGATCT GATGATAGCC ATGGGAACTT GGGCGGGTAA AGATTTGGCA AATGATCGTC ATACAACCCC CACGTTGGTT TTGTCTGCCA GTGATCCGCT AGCTGCTGGG ATTATAAAAA GTGTCGAAGA TTCAGGCTAT AGCCACTTAC ATGCGGCTGT TGATTTAGAT CGGTTTGCTC GTCAGGTAAA ACTCTTCCAT GAGTTAGTAG GATTTAAAAA TTTGGGGGTC GCTTTCGAAA ACAGCGCTAG CGGCCGTAGT TATGCTGCGA TTGATTCGAT TGAAATACTG TCTAAGGAAC GTGGCTTTGA CATTATTCCC TGTTATACGC AGAGTGATAT CAGCGAAAAG GCGATAGCTG AAGCCAGCGT GATCTCTTGC TTTGAGCTTC TTGCTAAGAG TGCTGAAGCA ATATATGTTA CCAATCAAGG AGGAGTGACT TATAATAGTA TTCCAAAACT AGTAGAGATT GCCAATAAGC ACCGGATACC AACATTCTCT CAGTCTGGTG CCGAGGAAGT TAAATATGGA TTTTTATTGA GCCTGTCGCG CGCAGCATTT CGTTATCTGG GTGATTTTCA TGCTCTCACA ATTGCTAAAG TCTTCAATGG TGCGAAACCT GGGCAATTGA TTCAACTTTT TGAGGAACCT CCAAAAGTGG CAGTGAATCT AAAAACAGCA AAAATCATCG GTTTTAATCC TCCGCTTCTT CTGCTTGGGG CAGCTGATGA GATCTACCAC GAAATCCAGA GCAGCCAATA A
|
Protein sequence | MYCIRNVLYI FICALISFTS IAEAEDKSSF STTPVLNDGK HWRVGYYEGG EYTDYQKEFT ATIKGLMKLG WIELQTIPEQ PGERTDLLWK WLSTQIKSDY IEFVPDAYYS AGWDEELRKQ SAAAVIDRLK NKPDIDLMIA MGTWAGKDLA NDRHTTPTLV LSASDPLAAG IIKSVEDSGY SHLHAAVDLD RFARQVKLFH ELVGFKNLGV AFENSASGRS YAAIDSIEIL SKERGFDIIP CYTQSDISEK AIAEASVISC FELLAKSAEA IYVTNQGGVT YNSIPKLVEI ANKHRIPTFS QSGAEEVKYG FLLSLSRAAF RYLGDFHALT IAKVFNGAKP GQLIQLFEEP PKVAVNLKTA KIIGFNPPLL LLGAADEIYH EIQSSQ
|
| |