Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3323 |
Symbol | |
ID | 4625737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4105586 |
End bp | 4106134 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798433 |
Product | peptide deformylase |
Protein accession | YP_944609 |
Protein GI | 119946929 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAA CTAAAAACAA GTCATATCCC ATTGCTCAAT TGGGCCATCC AGTATTAAGA CAAAGAGCGA CTGAGGTTGA AAATGTGCTT GCCGATGAAT GTCAGCAATT AATTAATCAA ATGATGTTCG CTGTATCAGA AGCCGGTGGT GTCGGTATTG CAGCACCACA AATTCATCAT AGTGTGCGCA TGTTTATTAT GTGTTCTAAA CCCAATGCTC GTTACCCGGA CGCGCCATTA ATGGCACCAA CAGCGATCAT TAACCCTGAA ATATTGCATT ATTCCAGTGA CAAAGTGAAA GGCTGGGAAG GCTGTTTAAG TGTACCTAGT ATGCGCGGTT TAGTACCAAG GCATAGCCAA ATCACTGTCC GTTATGTTGA TCAACAAGGT AATAAACAGC AGCAGGAATT AACGGGGTTT ATTGCCCGTA TTTTTCAGCA CGAATTAGAT CATTTGAACG GCTTAACCTT TATTGACCAG TTAGAATCGA CGCAAGATTT AATCAGTGAA GTTGAATGGT ATCAACAGTT CGCTTCTATA CAAAGTTAA
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Protein sequence | MNQTKNKSYP IAQLGHPVLR QRATEVENVL ADECQQLINQ MMFAVSEAGG VGIAAPQIHH SVRMFIMCSK PNARYPDAPL MAPTAIINPE ILHYSSDKVK GWEGCLSVPS MRGLVPRHSQ ITVRYVDQQG NKQQQELTGF IARIFQHELD HLNGLTFIDQ LESTQDLISE VEWYQQFASI QS
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