Gene Ping_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3323 
Symbol 
ID4625737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4105586 
End bp4106134 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID639798433 
Productpeptide deformylase 
Protein accessionYP_944609 
Protein GI119946929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA CTAAAAACAA GTCATATCCC ATTGCTCAAT TGGGCCATCC AGTATTAAGA 
CAAAGAGCGA CTGAGGTTGA AAATGTGCTT GCCGATGAAT GTCAGCAATT AATTAATCAA
ATGATGTTCG CTGTATCAGA AGCCGGTGGT GTCGGTATTG CAGCACCACA AATTCATCAT
AGTGTGCGCA TGTTTATTAT GTGTTCTAAA CCCAATGCTC GTTACCCGGA CGCGCCATTA
ATGGCACCAA CAGCGATCAT TAACCCTGAA ATATTGCATT ATTCCAGTGA CAAAGTGAAA
GGCTGGGAAG GCTGTTTAAG TGTACCTAGT ATGCGCGGTT TAGTACCAAG GCATAGCCAA
ATCACTGTCC GTTATGTTGA TCAACAAGGT AATAAACAGC AGCAGGAATT AACGGGGTTT
ATTGCCCGTA TTTTTCAGCA CGAATTAGAT CATTTGAACG GCTTAACCTT TATTGACCAG
TTAGAATCGA CGCAAGATTT AATCAGTGAA GTTGAATGGT ATCAACAGTT CGCTTCTATA
CAAAGTTAA
 
Protein sequence
MNQTKNKSYP IAQLGHPVLR QRATEVENVL ADECQQLINQ MMFAVSEAGG VGIAAPQIHH 
SVRMFIMCSK PNARYPDAPL MAPTAIINPE ILHYSSDKVK GWEGCLSVPS MRGLVPRHSQ
ITVRYVDQQG NKQQQELTGF IARIFQHELD HLNGLTFIDQ LESTQDLISE VEWYQQFASI
QS