| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2288 |
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| Symbol | |
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| ID | 4626817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2780491 |
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| End bp | 2781975 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639797429 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_943628 |
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| Protein GI | 119945948 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.715836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCTA ATTCACCTTG GTCCAAGCAC TTTATCCAAG TCGCCGGGGC CAATAACCAG
GCCTTTACAG TCGCCAGCCA GCAAGCACTG GATAATATAA ACAGTCTCTT TGCGCAGTGC
ACTAAACCTT ATTCGGGTTT GACGCCGGAT TTGTTAAAAG AAGCAATTTA TAACAGCAAT
TTAGATAAGG TTGAACCACT ACAGCAGGTT ATTGAGCAAA CCAATGATCT GATCGCTAAA
AATTCAATTA TGGTACAACA CCCGCATTGT ATTGCGCACC TTCATACCCC GCCATTAATC
TCGTCGGTGG TGGCTGAATT TTATATTGCG GCATTGAACC AATCAATGGA CTCATGGGAT
CAGGCATCTG CTGCGACTTA TCTAGAGCAG TTTATTATCG ATTGGCTGCT TAAAACCTAT
GCGCTCGGCG ATAGTGCTGA TGGTGTTTTC ACCAGCGGCG GCACGCAGAG TAATTTAATG
GGCTTATTAT TGGCACGGGA CTGGTTTGCA CAACACTATT CTGGCCATAA TATTCAGCAG
GATGGTTTAC CTGATTACGG TAATAAATTA CGTATTATCT GTTCAGATAA AAGCCATTTT
ACCATTCAAA AATCCGCCTC ATTAATGGGT CTTGGGGAAC GTTCGGTTGT GTGCATTAAA
ACCAATATTC AAGGTCAGAT GGATACTGTG CATTTGCAGA GCACCCTTGA TGATTTGCTG
GCACAGGGAT TATTGCCGAT GGCAGTGGTT GCCACCGCAG GCACAACGGA TCATGGCGCC
ATTGATGATT TACAGGAAAT TATAAAAATC AGCCGCCATT TCGGTCTGTG GTGCCATGTC
GACGGGGCCT ATGGTGGCGC ATTAATGCTT AGTCAAAAAC ATAAATCCCG TCTACTAGGC
ATGGAATCAG CTGATTCCGT GAGTGTGGAT TTTCATAAAC TCTTCTATCA AACCATCAGT
TGCGGCGCTT TATTAATTAA AAATAAAACA CACTTTAAAA GTCTGTTGCA CCATGCAGAT
TACCTTAACC GGGAAGGTGA TGATCTGCCT AACCTGGTTG ATAAAAGTAT TGCTACAACC
AAACGTTTTG ATGCATTGAA AATGTTTATG ACCTTAAAAG GGGTCGGTGC TAATACATTG
GGTGAAATGT ACGACAAGTT AATTGAACTC ACTCAGGCGG TGGCAAAATC TGTGCAGCAA
AACAGCCATT TTGAGCTTTG TTGTGAGCCA TTATTATCAA CGGTTTTATT TCGCTTAAGC
ACAAAATATC AAGGTCTATT AACGCTTAAT GAGTTTAATC AGCTACAGCA AAAATTACGT
TTGCAATTAT TAACCTGTGG CGATGCTGTG ATTGGCGAAA CCAAAGTTGA TGGCAAACTT
TATCTTAAAT TTACCCTGTT AAACCCCTGT TTAACATTAA ACAATTTTGA TAATTTATTT
AAAAAAATCG AAAGGCATGC ACAACAATTA ATACCTAATA CCTAA
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| Protein sequence | MQPNSPWSKH FIQVAGANNQ AFTVASQQAL DNINSLFAQC TKPYSGLTPD LLKEAIYNSN
LDKVEPLQQV IEQTNDLIAK NSIMVQHPHC IAHLHTPPLI SSVVAEFYIA ALNQSMDSWD
QASAATYLEQ FIIDWLLKTY ALGDSADGVF TSGGTQSNLM GLLLARDWFA QHYSGHNIQQ
DGLPDYGNKL RIICSDKSHF TIQKSASLMG LGERSVVCIK TNIQGQMDTV HLQSTLDDLL
AQGLLPMAVV ATAGTTDHGA IDDLQEIIKI SRHFGLWCHV DGAYGGALML SQKHKSRLLG
MESADSVSVD FHKLFYQTIS CGALLIKNKT HFKSLLHHAD YLNREGDDLP NLVDKSIATT
KRFDALKMFM TLKGVGANTL GEMYDKLIEL TQAVAKSVQQ NSHFELCCEP LLSTVLFRLS
TKYQGLLTLN EFNQLQQKLR LQLLTCGDAV IGETKVDGKL YLKFTLLNPC LTLNNFDNLF
KKIERHAQQL IPNT
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