Gene Ping_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0556 
Symbol 
ID4623933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp717103 
End bp718965 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content44% 
IMG OID639795752 
Producthypothetical protein 
Protein accessionYP_942009 
Protein GI119944329 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5309] Exo-beta-1,3-glucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GTAGTTACAA AATATTTTTA ATAGCATTCC TATCGATATT TATGTTTGCC 
TGTGGGGATG AACCCTTAAC AACATTATTA AATAATACGT CTTCTGCAGG TGATACCGGC
ACTCTACAAC CGCAGGCCAT CGTCAGCGAT GCACCGCTGT CAAAATCAGG CGAGCAGATA
CTCGGTAATC CGGATTATCA GGCGATCTCC TACGGTGCCT TTAGAGCACC AACACGTGAA
GAAGCAACGG TGCCCAGTGT TGCTGATCTT AAAGAAGATA TGCTGCTACT GCAGGCGATG
GATATAAAAG TATTAAGAAC TTATAACACT CAAATTTTTA GTGATACGGC AAATCTACTG
GAAGCCATTG ATCAGTTAAT GGCTGCTGAT CCTAACTTTG AAATGTACGT GATGCTGGGT
GTTTGGGTAC AAGCACAAGG CTCTTATACT GCTAATGTAG ATAATACAAC TGGAGATGCT
GCGCTGAACC GAGCTGAAAT GGATAAAGCA ATAGAGATGG CACAGAATTA TCCTGAGATT
ATTAAAGTGA TTGCCGTGGG TAATGAAGCG ATGGTGGACT GGCAGGCACA TGATATTCCT
GTCAGTGTTG TGCTTGGCTA TGTAAACGAG TTACAAGGCT TAAAAGCTGA CAGTACTATT
TCTGCTGATA TCTGGATCAC AAGTTCAGAT AATCAGGCCG TTTGGTCTGG TAGCGATCCG
AGAGTATCTG GACAACTGAA TGATTTAAAT GCCTTGATTG CAGCGGTTGA TTATATCTCA
CTGCATACTT ACCCCTTCCA TGATACGCAC CACATTCCCG ATTTCTGGCA GGTTCCTGCG
GATCAAGCTG GTTTAACGGA TCAACAGAAA ATTGATGCCG CGATGGTCAG AGCTCAAGCG
CGTGTTGTTG AACAATATAC GGCTGCACAA GCTTATATGT TAAAGTTAGG TATCAATAAA
CCGATCCACA TTGGCGAAAC AGGCTGGGCA ACAGTGGGTA GCCCGGGTGG TGAAGATTTT
ACTCAATCCG GCTCTGCAGC AGCGGACGAA TACAAACAAA AAATGGCTTA TGATGCACTG
CGTACCTGGT CAAATGAGTT TGGTGCATCG CTGTTCTTTT TTGAAGCTTT TGATGAGCAG
TGGAAAGCGG GCACAGAAAA CCCTGCAACT CACCCTGAAA AACATTTTGG CTTAATTAAT
ATGCAGGGCG AAGCGAAATA CCTGCTTTGG GATCTGGTTG ATGCCGGAGC ATTTAATGGC
CTGGAAAGGG ATGGTTTACA AATTACTAAA ACTTACGGTG GTAATGTAGC GGCTATGATG
GATGAGGTCT TTGTGCCGCC TGCAGCGCCG GTAACTAACG AACCTGTAGC GGGTGAGTTC
ATTGTCCTAG GCATTTCATT ATATTCAAAT GCGCTTGCTT ACGGTTGGGA TTCTCCAGAG
ACCGCCTGGG CTGGTGTTAA TGATGATACG GGTGTCTTAA CGGTAGCAAC AGATCCTGAT
ACTGCAGCAA CTTGGGGCTG GGGAGCAGGT GTTGGAATTC CAAATGAGAC CAGTAATCTA
AGCACTTCTA CACAGATTAC CTTTGAAATT AAAGGTGATG CCGCTTTTGG CTTTTACCTT
GGCTTCCAAA CGACCAAAGG CGCAGGAACA AATCACTGGG TTAGATTTAA TACTGGCAGC
TATACACTCA CTGACCAGTG GGCTAAATAT ACCATTAGTC TTAGTGACTT TTCGGACTTT
GCAAGTGGCA ATTTAGAGGT TGTCAATTCA CCCTTTACTA TTGCTGATAT TTACGAAACG
TCGGGAGGCA GTGCGCCTAC CTTAAGTACG ATTGAGGTGA AAAATATTTC CTGGTTAGAA
TAA
 
Protein sequence
MKKSSYKIFL IAFLSIFMFA CGDEPLTTLL NNTSSAGDTG TLQPQAIVSD APLSKSGEQI 
LGNPDYQAIS YGAFRAPTRE EATVPSVADL KEDMLLLQAM DIKVLRTYNT QIFSDTANLL
EAIDQLMAAD PNFEMYVMLG VWVQAQGSYT ANVDNTTGDA ALNRAEMDKA IEMAQNYPEI
IKVIAVGNEA MVDWQAHDIP VSVVLGYVNE LQGLKADSTI SADIWITSSD NQAVWSGSDP
RVSGQLNDLN ALIAAVDYIS LHTYPFHDTH HIPDFWQVPA DQAGLTDQQK IDAAMVRAQA
RVVEQYTAAQ AYMLKLGINK PIHIGETGWA TVGSPGGEDF TQSGSAAADE YKQKMAYDAL
RTWSNEFGAS LFFFEAFDEQ WKAGTENPAT HPEKHFGLIN MQGEAKYLLW DLVDAGAFNG
LERDGLQITK TYGGNVAAMM DEVFVPPAAP VTNEPVAGEF IVLGISLYSN ALAYGWDSPE
TAWAGVNDDT GVLTVATDPD TAATWGWGAG VGIPNETSNL STSTQITFEI KGDAAFGFYL
GFQTTKGAGT NHWVRFNTGS YTLTDQWAKY TISLSDFSDF ASGNLEVVNS PFTIADIYET
SGGSAPTLST IEVKNISWLE