Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0556 |
Symbol | |
ID | 4623933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 717103 |
End bp | 718965 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639795752 |
Product | hypothetical protein |
Protein accession | YP_942009 |
Protein GI | 119944329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA GTAGTTACAA AATATTTTTA ATAGCATTCC TATCGATATT TATGTTTGCC TGTGGGGATG AACCCTTAAC AACATTATTA AATAATACGT CTTCTGCAGG TGATACCGGC ACTCTACAAC CGCAGGCCAT CGTCAGCGAT GCACCGCTGT CAAAATCAGG CGAGCAGATA CTCGGTAATC CGGATTATCA GGCGATCTCC TACGGTGCCT TTAGAGCACC AACACGTGAA GAAGCAACGG TGCCCAGTGT TGCTGATCTT AAAGAAGATA TGCTGCTACT GCAGGCGATG GATATAAAAG TATTAAGAAC TTATAACACT CAAATTTTTA GTGATACGGC AAATCTACTG GAAGCCATTG ATCAGTTAAT GGCTGCTGAT CCTAACTTTG AAATGTACGT GATGCTGGGT GTTTGGGTAC AAGCACAAGG CTCTTATACT GCTAATGTAG ATAATACAAC TGGAGATGCT GCGCTGAACC GAGCTGAAAT GGATAAAGCA ATAGAGATGG CACAGAATTA TCCTGAGATT ATTAAAGTGA TTGCCGTGGG TAATGAAGCG ATGGTGGACT GGCAGGCACA TGATATTCCT GTCAGTGTTG TGCTTGGCTA TGTAAACGAG TTACAAGGCT TAAAAGCTGA CAGTACTATT TCTGCTGATA TCTGGATCAC AAGTTCAGAT AATCAGGCCG TTTGGTCTGG TAGCGATCCG AGAGTATCTG GACAACTGAA TGATTTAAAT GCCTTGATTG CAGCGGTTGA TTATATCTCA CTGCATACTT ACCCCTTCCA TGATACGCAC CACATTCCCG ATTTCTGGCA GGTTCCTGCG GATCAAGCTG GTTTAACGGA TCAACAGAAA ATTGATGCCG CGATGGTCAG AGCTCAAGCG CGTGTTGTTG AACAATATAC GGCTGCACAA GCTTATATGT TAAAGTTAGG TATCAATAAA CCGATCCACA TTGGCGAAAC AGGCTGGGCA ACAGTGGGTA GCCCGGGTGG TGAAGATTTT ACTCAATCCG GCTCTGCAGC AGCGGACGAA TACAAACAAA AAATGGCTTA TGATGCACTG CGTACCTGGT CAAATGAGTT TGGTGCATCG CTGTTCTTTT TTGAAGCTTT TGATGAGCAG TGGAAAGCGG GCACAGAAAA CCCTGCAACT CACCCTGAAA AACATTTTGG CTTAATTAAT ATGCAGGGCG AAGCGAAATA CCTGCTTTGG GATCTGGTTG ATGCCGGAGC ATTTAATGGC CTGGAAAGGG ATGGTTTACA AATTACTAAA ACTTACGGTG GTAATGTAGC GGCTATGATG GATGAGGTCT TTGTGCCGCC TGCAGCGCCG GTAACTAACG AACCTGTAGC GGGTGAGTTC ATTGTCCTAG GCATTTCATT ATATTCAAAT GCGCTTGCTT ACGGTTGGGA TTCTCCAGAG ACCGCCTGGG CTGGTGTTAA TGATGATACG GGTGTCTTAA CGGTAGCAAC AGATCCTGAT ACTGCAGCAA CTTGGGGCTG GGGAGCAGGT GTTGGAATTC CAAATGAGAC CAGTAATCTA AGCACTTCTA CACAGATTAC CTTTGAAATT AAAGGTGATG CCGCTTTTGG CTTTTACCTT GGCTTCCAAA CGACCAAAGG CGCAGGAACA AATCACTGGG TTAGATTTAA TACTGGCAGC TATACACTCA CTGACCAGTG GGCTAAATAT ACCATTAGTC TTAGTGACTT TTCGGACTTT GCAAGTGGCA ATTTAGAGGT TGTCAATTCA CCCTTTACTA TTGCTGATAT TTACGAAACG TCGGGAGGCA GTGCGCCTAC CTTAAGTACG ATTGAGGTGA AAAATATTTC CTGGTTAGAA TAA
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Protein sequence | MKKSSYKIFL IAFLSIFMFA CGDEPLTTLL NNTSSAGDTG TLQPQAIVSD APLSKSGEQI LGNPDYQAIS YGAFRAPTRE EATVPSVADL KEDMLLLQAM DIKVLRTYNT QIFSDTANLL EAIDQLMAAD PNFEMYVMLG VWVQAQGSYT ANVDNTTGDA ALNRAEMDKA IEMAQNYPEI IKVIAVGNEA MVDWQAHDIP VSVVLGYVNE LQGLKADSTI SADIWITSSD NQAVWSGSDP RVSGQLNDLN ALIAAVDYIS LHTYPFHDTH HIPDFWQVPA DQAGLTDQQK IDAAMVRAQA RVVEQYTAAQ AYMLKLGINK PIHIGETGWA TVGSPGGEDF TQSGSAAADE YKQKMAYDAL RTWSNEFGAS LFFFEAFDEQ WKAGTENPAT HPEKHFGLIN MQGEAKYLLW DLVDAGAFNG LERDGLQITK TYGGNVAAMM DEVFVPPAAP VTNEPVAGEF IVLGISLYSN ALAYGWDSPE TAWAGVNDDT GVLTVATDPD TAATWGWGAG VGIPNETSNL STSTQITFEI KGDAAFGFYL GFQTTKGAGT NHWVRFNTGS YTLTDQWAKY TISLSDFSDF ASGNLEVVNS PFTIADIYET SGGSAPTLST IEVKNISWLE
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