Gene Ping_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0456 
Symbol 
ID4623637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp578687 
End bp579808 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content39% 
IMG OID639795650 
Productglycosyl transferase, group 1 
Protein accessionYP_941913 
Protein GI119944233 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0645545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00671618 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAAATA TTTGTCTTGT CGCTCACTTT GCATATGGAG CACTCACGGG GGGCAGTCAA 
GGAGCAGTCG GCGGAGTTGA AAGGCAAACG AGCCTGATGG CGAAATGGTT AGTGGCGAAA
GGTCATAAAG TCTCGTTGCT GACATGGGCA GAAGGGGGTG ATGATGATGA AGTAATTGAT
GGTGTGCAAG TGATTAAAAT CTGTCGTCGA GACTCAGGGT TACCAGGTAT TCGTTTTTTT
CATCCAAGAT GGACTGGTTT AATTAGTGCT ATGAAACGTG CTAATGCTGA TGTTTATTAT
CAAAATTGCG GTGAGTATAT TACAGGGCAG GTTGCTATGT GGTGTAAAGA AAATAATAAA
AAATTTCTCT ATTCAGTAGC AAGTGATGCC GATGCTGATC CTCGTTTTCC TGTAATGCAT
ACTTTAAGAG AGCGGTGGTT ATATAAGTAT GGTTTATTGA ATGCAGATAA GGTGATTGTC
CAGACTAAAA CGCAAATGAA ATTATTGAAA AAAGGTTTTG ATTTAGACTC TTCGATTATG
CCTATGCCAT GCTTAGGTCC CGATCAAACT CAATATCAAC CATTAGAATG GAATACTGAT
AAAGCTACCA TATTATGGGC TGCTCGCATT CACGAATGTA AGCGATTAGA GTTGTTCTTA
CAAGTGGCGA CAGAGTTACC TGAATATAAT TTTGTTGTTG CTGGGAGTTC AGGTAAAGAA
GATGCTTATT CACAAGGGTT AATGGATAAG ATGAAGCAAC TGGAGAACGT AACCTACCTG
GGTATGGTCG CGCGTGCTGA TATGCCTGCA CTATATCGCG CTAGCACGGT GTTTTGCTGT
TCGTCAGAAT ATGAAGGTTT TCCTAATACA TTTTTAGAGG CATGGAGCCA AGGTTTACCT
GTTGTTTCGA CTTTTGATCC AGATCATTTG ATACAGGAAA GAAAACTGGG GATCAGCGCA
ACTAATAAAG ATGAATTAGT CTTGGGAATA AGTGAAATTT GTACTAATCG CGAATTATGG
CAATTACATT CGTCTAATGC ACGACGTTAT TATCAGGAGA ATCATTCTGT TGATAAAGTT
ATGGAACGTT TTGAAAAAAT CTTTATTAAT CTTGTAAGAT AA
 
Protein sequence
MVNICLVAHF AYGALTGGSQ GAVGGVERQT SLMAKWLVAK GHKVSLLTWA EGGDDDEVID 
GVQVIKICRR DSGLPGIRFF HPRWTGLISA MKRANADVYY QNCGEYITGQ VAMWCKENNK
KFLYSVASDA DADPRFPVMH TLRERWLYKY GLLNADKVIV QTKTQMKLLK KGFDLDSSIM
PMPCLGPDQT QYQPLEWNTD KATILWAARI HECKRLELFL QVATELPEYN FVVAGSSGKE
DAYSQGLMDK MKQLENVTYL GMVARADMPA LYRASTVFCC SSEYEGFPNT FLEAWSQGLP
VVSTFDPDHL IQERKLGISA TNKDELVLGI SEICTNRELW QLHSSNARRY YQENHSVDKV
MERFEKIFIN LVR