Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0456 |
Symbol | |
ID | 4623637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 578687 |
End bp | 579808 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639795650 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_941913 |
Protein GI | 119944233 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0645545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00671618 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAAATA TTTGTCTTGT CGCTCACTTT GCATATGGAG CACTCACGGG GGGCAGTCAA GGAGCAGTCG GCGGAGTTGA AAGGCAAACG AGCCTGATGG CGAAATGGTT AGTGGCGAAA GGTCATAAAG TCTCGTTGCT GACATGGGCA GAAGGGGGTG ATGATGATGA AGTAATTGAT GGTGTGCAAG TGATTAAAAT CTGTCGTCGA GACTCAGGGT TACCAGGTAT TCGTTTTTTT CATCCAAGAT GGACTGGTTT AATTAGTGCT ATGAAACGTG CTAATGCTGA TGTTTATTAT CAAAATTGCG GTGAGTATAT TACAGGGCAG GTTGCTATGT GGTGTAAAGA AAATAATAAA AAATTTCTCT ATTCAGTAGC AAGTGATGCC GATGCTGATC CTCGTTTTCC TGTAATGCAT ACTTTAAGAG AGCGGTGGTT ATATAAGTAT GGTTTATTGA ATGCAGATAA GGTGATTGTC CAGACTAAAA CGCAAATGAA ATTATTGAAA AAAGGTTTTG ATTTAGACTC TTCGATTATG CCTATGCCAT GCTTAGGTCC CGATCAAACT CAATATCAAC CATTAGAATG GAATACTGAT AAAGCTACCA TATTATGGGC TGCTCGCATT CACGAATGTA AGCGATTAGA GTTGTTCTTA CAAGTGGCGA CAGAGTTACC TGAATATAAT TTTGTTGTTG CTGGGAGTTC AGGTAAAGAA GATGCTTATT CACAAGGGTT AATGGATAAG ATGAAGCAAC TGGAGAACGT AACCTACCTG GGTATGGTCG CGCGTGCTGA TATGCCTGCA CTATATCGCG CTAGCACGGT GTTTTGCTGT TCGTCAGAAT ATGAAGGTTT TCCTAATACA TTTTTAGAGG CATGGAGCCA AGGTTTACCT GTTGTTTCGA CTTTTGATCC AGATCATTTG ATACAGGAAA GAAAACTGGG GATCAGCGCA ACTAATAAAG ATGAATTAGT CTTGGGAATA AGTGAAATTT GTACTAATCG CGAATTATGG CAATTACATT CGTCTAATGC ACGACGTTAT TATCAGGAGA ATCATTCTGT TGATAAAGTT ATGGAACGTT TTGAAAAAAT CTTTATTAAT CTTGTAAGAT AA
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Protein sequence | MVNICLVAHF AYGALTGGSQ GAVGGVERQT SLMAKWLVAK GHKVSLLTWA EGGDDDEVID GVQVIKICRR DSGLPGIRFF HPRWTGLISA MKRANADVYY QNCGEYITGQ VAMWCKENNK KFLYSVASDA DADPRFPVMH TLRERWLYKY GLLNADKVIV QTKTQMKLLK KGFDLDSSIM PMPCLGPDQT QYQPLEWNTD KATILWAARI HECKRLELFL QVATELPEYN FVVAGSSGKE DAYSQGLMDK MKQLENVTYL GMVARADMPA LYRASTVFCC SSEYEGFPNT FLEAWSQGLP VVSTFDPDHL IQERKLGISA TNKDELVLGI SEICTNRELW QLHSSNARRY YQENHSVDKV MERFEKIFIN LVR
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