| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0423 |
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| Symbol | |
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| ID | 4623839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 533703 |
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| End bp | 536345 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639795619 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_941882 |
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| Protein GI | 119944202 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0262641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAA AATTTTTTAA TCTTCAAATA GACAAAGCAT TAACGATATC AATGCTTGTA
ACAACTATCT TTCTTTCTGC CTGCGGAGAA TCTAAAGAGG TACAGAAGAG CACCAACAAA
GATGCCTACC TTGCACAGGG TCAATCATAC CTTGATGCAT ACCAATTTAA AGCTGCATTT
AGTGCTGCCA ATGATGCGAT TAAAATAGAT CCAACCAGTA TTGATGGTTA TTTGATCATA
ACAAAGATCA ACCAGGAATC AGGGCAACCG CTAGAAAGCG TTAAACTGCT TGAATCTTTT
ACAGGTATTA AAGATGTTGA ATATTATTTT GCACTGCTAG ATGCTTATCA ACAATCTGGA
AAAGTAATCT CGGCTCAAAG CCTAATCGAG CATCAGACAG AAATTTTACA AAATAAACCT
CAACATTTGC AGTTTGTAAA AGCGCAACAG TTGCTTTTAA GTAATAATTT ACAACAGGCA
AAGATAGCCT TTACAGAATC ATTAAAAAAT CCAGATTATA AAATTAAGAG TATGCTTGCA
CTTGCAAAAA TTGAAGCTGT CTCAGACAAT CACAGCGCGG CCCTCACTAC GCTTGATGAA
ATTATAAAAT CAGAGCCAAA GAACACCGAA GCGCTCTTCC TTAAAAGTAT GATTTACATT
AAAACCGGGG ATCTTACTAA TGCAGAGAAG TCATTATCGG AAGCTTTGTC CGTCCTTCCA
ACTAGTGATA TTTTCACCTA TCAACGTATC CAGATTATTC AAAGCTTGGC CAATGTGCTA
ACACAACAAG GCCGCGGTTC AGAAGCGCTT ATATATACAC GTATTCTCTC CGAAGAGTTT
CCTCTGGCAG AGTCAGTTTC AATGCAGTAT ACACGTGCGC TTGAACTATT TGAAAATCAA
CAATTTTCAA CTGCTAAAAA GGTATTATTA GAAATATTAG ATAATAATCC CGGGCACAAA
AAATCAGCCA CTTTATTAGC CTTGATTTTC TACAATGAAG GGAATTCTGA AAGTGCAGGA
AAATACTTAA CAGATATTAT CGATCCAGAA ATATCCCCGA TTAAACTCAC TGAGTTGTAT
ATGGCAACTC AATTGCAGCA AAACAAATCA GAGGAAGTCT TAAACTTACT CAAAAACATA
CCTGAAAAAA ACAGAAATGT TGATACCTGG GTACTTTATG CAAATGCGGC AATACAACAA
AAAGAGTTTA CAAAAGCAAA AATGGCACTT GATAAAGCTA AATTATTAGC ACCACAATCA
ATTCGTCTCG CGTTAACAGA AAATTTTTAT TATAACAGTT TACCTGAGCC CCAAGCAGAA
AAAGCATTAG CCTCCATTTA TGTTGTTTTG TCTTCTCATC CCGAAAATAA TACATTGCAA
ATGTTATATC TTCGTCAACT GCTTACTTTT AAAAAATTCA CTGAAGCGGA TAAGTATGTT
GCCAATTTAA AAAGCATGTA TAGCGAAAAT ACCGATACAC AATTAATTGT CGCAAACTAC
TATATTTATC AAAACAAATC AGGTGAAGCT AGAAAAATAA TAGAAAAGAT TTTGGCATTG
GAAAATAACC ATCTCCAAGC ACTTTATAGC CTGGTCCAGA TCAACAAAAT AGAAAAAAAA
TGGCTATCAA CACTAGATAA TTACAAACAA ATCATAAGCT ATTATCCGAC GGAAATTACG
TCTTACACCG GTATTGTTCG CAGCTTAATA GATCAGCAAA AAGATCCGTT AAAGGCTGCC
AACTATCTAC CTAAAAATTA TGAAGCCAGC CTATTAGCAT TAACGCTGGC AACGTTAACC
CTGCAGCAAA ATAAACTTGA CTTGGCAACG GGTTATGCAA AAGAAGCGGG AAATGAACTG
CCGCAAAAAT ATCAAGCAAG CCTTAATCAA TTAACCGTAC AACTTAATTT ATTAAAGGCG
AGTAAAGCTT TCGCAGAAAA TGATTATCCA AAAGCCAAAG AAATACTAAT CGCAGCACTT
AAGCAAGAAC CCGAAAATAT CACGCTGTTA AGCCTACTAA CTGATATTGA AATCCGCTCA
GAACAATATA TTGAAGCGCG AAAAATAACA GATAAGATTG CTAAAATCTT ACCAAAGAGC
TCTTTAGCAA CAAGGTTGTA TGCAGGAATA TTTGTAGCCC AAGAAAAGCC ACAACAAGCA
ATTAATTTGT TAACGGCTTA CTGGCAAAAA ACAAAAGATG AACAGGTTGC AGACCAACTG
TATCTATTAT TGGGAAATAA TAATTCAGAA AAAGCGGCGG CTTTTCTTAA TGAATGGCAG
CAAGCCTTTC CCAAAAGCCT AACAGCAATA CGCTACCAAG CAATTTATTT GCAAAATAAT
GGCAAGAAAG AGCAAGCTCT GCAGGTCTAT CAAGCACAAC TGAAACAAAC ACCGAATGAT
GTTGTCAGCT TAAACAATTC CGCCTGGTTA TATTTTGAAC AAGGCAATCC TATTGCCATC
ACCTTAGCTG AGAAAGCCTA TAAATTAATG CCTGAAAATG CTGCCATTTT AGATACTTAC
GGCTGGATTT TATATAAGAA TGGAGAACGG CAGCAGGGCA AAAAGTTAAT TGAAGAAGCC
ATGCGATTAT CTCCCAATGA GCCAGAAATC AAATCTCACT TGCTGGAAAT AAATAATCAA
TAA
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| Protein sequence | MKLKFFNLQI DKALTISMLV TTIFLSACGE SKEVQKSTNK DAYLAQGQSY LDAYQFKAAF
SAANDAIKID PTSIDGYLII TKINQESGQP LESVKLLESF TGIKDVEYYF ALLDAYQQSG
KVISAQSLIE HQTEILQNKP QHLQFVKAQQ LLLSNNLQQA KIAFTESLKN PDYKIKSMLA
LAKIEAVSDN HSAALTTLDE IIKSEPKNTE ALFLKSMIYI KTGDLTNAEK SLSEALSVLP
TSDIFTYQRI QIIQSLANVL TQQGRGSEAL IYTRILSEEF PLAESVSMQY TRALELFENQ
QFSTAKKVLL EILDNNPGHK KSATLLALIF YNEGNSESAG KYLTDIIDPE ISPIKLTELY
MATQLQQNKS EEVLNLLKNI PEKNRNVDTW VLYANAAIQQ KEFTKAKMAL DKAKLLAPQS
IRLALTENFY YNSLPEPQAE KALASIYVVL SSHPENNTLQ MLYLRQLLTF KKFTEADKYV
ANLKSMYSEN TDTQLIVANY YIYQNKSGEA RKIIEKILAL ENNHLQALYS LVQINKIEKK
WLSTLDNYKQ IISYYPTEIT SYTGIVRSLI DQQKDPLKAA NYLPKNYEAS LLALTLATLT
LQQNKLDLAT GYAKEAGNEL PQKYQASLNQ LTVQLNLLKA SKAFAENDYP KAKEILIAAL
KQEPENITLL SLLTDIEIRS EQYIEARKIT DKIAKILPKS SLATRLYAGI FVAQEKPQQA
INLLTAYWQK TKDEQVADQL YLLLGNNNSE KAAAFLNEWQ QAFPKSLTAI RYQAIYLQNN
GKKEQALQVY QAQLKQTPND VVSLNNSAWL YFEQGNPIAI TLAEKAYKLM PENAAILDTY
GWILYKNGER QQGKKLIEEA MRLSPNEPEI KSHLLEINNQ
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