| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4127 |
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| Symbol | |
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| ID | 8255262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4988639 |
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| End bp | 4989385 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937792 |
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| Product | regulatory protein DeoR |
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| Protein accession | YP_003094380 |
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| Protein GI | 255534008 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.260029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.917732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAAA AAGAAAGGCA CGACTTTGTA ATGCGCCAGA TCAACTTACA CAACCGCGTA
CTTACATCTG ACCTTGTTCA ATTGCTCAAT GTCTCTGAAG ACACGATCAG GCGTGATCTT
CAGGAGTTGG CAGACCAAGG CCAGCTTTCT AAAGTACATG GTGGCGCGCT CTCAAAATCT
TATCAATCTT TTTTTGATGA CAGTGACGTT TATGCCAGAG AGGCCAAGAT CCTTATTGCG
AAGAAAAACA TCCCCTTAAT AAAAGACGGA ATGGTCATTT TAACGGGTGG AGGAACATCT
ATTATAGAGC TGGTAAAGCA ACTGCCCGAA AATTTAAATG CGACTTTCTT TACCATCAGC
CCTTTTGTAG CCATAGAGCT GGCAAAATAT CCCCAGGTTG AGGTGATCCT TATTGGTGGT
TTATTTTCTA AAAATTCGCA GGTAACTTAT GGAGGGTATG TCATCAACCA GCTTTTAGAG
ATCAATGCCG ATCTTTGCCT GCTGGGTACA AGTGCCATCC ACCCGCAGGA TGGATTAACC
GACACCGACT GGGAGATCAA TCAGCTCAAG AAAGCCATGT TCAGTTCCTC CAAGAAGGCT
GCGATCTTAT GTATTTCAGA AAAACTAGAT ACTTCATTAA GACTAAAGGT AGCTTCTCTG
GATAATATAG ATTACCTGAT TACAGAGCTT GATCCCAGAG CCGAAGAACT TAATCCATAT
AGAGTAAAAA CACTGCAGAT ATTATAG
|
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| Protein sequence | MLKKERHDFV MRQINLHNRV LTSDLVQLLN VSEDTIRRDL QELADQGQLS KVHGGALSKS
YQSFFDDSDV YAREAKILIA KKNIPLIKDG MVILTGGGTS IIELVKQLPE NLNATFFTIS
PFVAIELAKY PQVEVILIGG LFSKNSQVTY GGYVINQLLE INADLCLLGT SAIHPQDGLT
DTDWEINQLK KAMFSSSKKA AILCISEKLD TSLRLKVASL DNIDYLITEL DPRAEELNPY
RVKTLQIL
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