Gene Phep_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3650 
Symbol 
ID8254781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4364151 
End bp4364843 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content43% 
IMG OID644937311 
Productprotein of unknown function DUF1080 
Protein accessionYP_003093903 
Protein GI255533531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT ATATTTTTTC GGCCATGATA CTTACCCTGA TGGGCGGTAG TATTGCAAAC 
GCCCAGTCGG GCAAAAAAGG ATTTACTAAA TTATTTGATG GCAAAACCAC CAAAGGCTGG
CATACTTACG GTAAAACCAC TACCGGATCA AAATGGAAAG TTGAAGATGG CACCCTTCAT
TTTACACCTG CGGGAGATAA AAGTGAGGGT GGCGACCTGG TAACAAACGA GGAATACAGC
AATTTCCACT TAAAACTCGA CTGGAAGGTT GCCCCTAAAG CCAATAGCGG TATCATTTTT
TATGTACATG AGGATGCAGC AAAATATCCG CAAACCTATA GTACGGGGCT GGAAATGCAG
GTGCTGGACA ATGATGGCCA TCCTGATGGC AAGATCACCA AACATCGTGC AGGCGACCTG
TATGATCTGG TAAAAAGCAG CTCAGAACCG GTTAAACCTG TGGGCGAATG GAATACTGCC
GAGATCATTT CTAAAAATGG CAAGCTGGAA CAATACCTGA ATGGCGTAAA AGTGGTATCT
ACCACGCTTT GGGATGAGAA CTGGAAAAAC CTGGTTGCAG GAAGTAAATT TGCCAAATGG
GAAAACTGGG GTACTTTTAA ATCTGGTAAA ATTGCTTTGC AGGATCATGG CAATGAGGTA
TGGTACCGCA ACATCATGAT TAAAAAGCTG TAA
 
Protein sequence
MKQYIFSAMI LTLMGGSIAN AQSGKKGFTK LFDGKTTKGW HTYGKTTTGS KWKVEDGTLH 
FTPAGDKSEG GDLVTNEEYS NFHLKLDWKV APKANSGIIF YVHEDAAKYP QTYSTGLEMQ
VLDNDGHPDG KITKHRAGDL YDLVKSSSEP VKPVGEWNTA EIISKNGKLE QYLNGVKVVS
TTLWDENWKN LVAGSKFAKW ENWGTFKSGK IALQDHGNEV WYRNIMIKKL