| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3255 |
|---|
| Symbol | |
|---|
| ID | 8254374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3862434 |
|---|
| End bp | 3863585 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644936908 |
|---|
| Product | Kelch repeat-containing protein |
|---|
| Protein accession | YP_003093512 |
|---|
| Protein GI | 255533140 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03548] cyclically-permuted mutatrotase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0619981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0696551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGAC CCTTGCTATT CTTTTATATC ATGTTAATTA CAAACCCTGT TTTTGCGCAA
AGAACTGAAG TTACCCGTGT GGAGTGGGCC GAGATCGCCC GGCTGGAGGA TAGGAATGGG
AAACCTTCTT TAGGTTTTGC AGGAGCAGTT AATGCCGTTG ATAATCACGT GTTGATTGTG
GCTGGAGGAG CAAATTTTCC GGATAAAAAG CCATGGGATG GTGGGAAAAA GCAATATTCG
AAAGAAATTC ATGTACTCCA GCGCGCCGGA AAGAACTTTG TCTGGAACAA GAATAATGTG
GCCCATTTAA CAGAACCAAT TGCCTACTGT GGCAATACTT CAACTCCTGT CGGAATTGTT
TATGCGGGCG GAGAAAATGA CAAGGGATTG TCCAGTAAAG CCTATCTTTT AAATTGGGAT
GCAGTTATGA ACCAGGTACT GATAAAACAA TTGCCGGACC TGCCGGTTGC ACTTACCAAT
ATTTCCCTAA CGAGTATGGG AAATGTTGTA TATGCAGTCG GGGGAGACGG CAAACAGGAA
TCTTCGGCTT CTTTTTTTAG TCTGGACTTG GACGATGATC ATCCCAAATG GCTGACTTTA
CCTGAGCTCC CGGTTGCTTT GGCCAATGCC GTTGTAGTGG CACAAAATGC TGGTATTTAT
GTAATTGGTG GAAGATCAAA AACTGCATCA GGCATCAGCG AGCTGCGGAA TAGTACTTTT
TTCTACAACC CGTACAAAAA GTCCTGGAAA TCCTGCGCAG TGATTAGCGA TGGAAAAAAT
ACCATGAATT TTTCTGCAGG AGCAGGTGTT GCCATTGATG ATCATTTCAT TTTAATCACG
GGTGGTGATG ACGGGAAAGT ATTCCATCAA ATAGAACAAT ATATCCTGCA AATAGCTCAG
GCCAAGACGG AAGAAGAAAA ATCCAGACTG ATTGAGACAA AGAACAAATT GAGCATCCAT
CACAAAGGTT TTTATAGAGG GATGTTGTTG TACCATGCAT TGGAAAACAC CTGGACTAAA
ATTGGTGAGA TACCTTTTGC AGCCCAGGTA ACCACAACTG CAACACGCTG GGATGGAAAT
ATTATCCTTT CCAGTGGAGA GGTAAAACCT GGTGTTCGTA CAGCGGCTAT CAGATCAGGC
AGAATTGAGT AA
|
|---|
| Protein sequence | MYRPLLFFYI MLITNPVFAQ RTEVTRVEWA EIARLEDRNG KPSLGFAGAV NAVDNHVLIV
AGGANFPDKK PWDGGKKQYS KEIHVLQRAG KNFVWNKNNV AHLTEPIAYC GNTSTPVGIV
YAGGENDKGL SSKAYLLNWD AVMNQVLIKQ LPDLPVALTN ISLTSMGNVV YAVGGDGKQE
SSASFFSLDL DDDHPKWLTL PELPVALANA VVVAQNAGIY VIGGRSKTAS GISELRNSTF
FYNPYKKSWK SCAVISDGKN TMNFSAGAGV AIDDHFILIT GGDDGKVFHQ IEQYILQIAQ
AKTEEEKSRL IETKNKLSIH HKGFYRGMLL YHALENTWTK IGEIPFAAQV TTTATRWDGN
IILSSGEVKP GVRTAAIRSG RIE
|
|---|
| |