Gene Phep_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2881 
Symbol 
ID8253991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3428713 
End bp3430071 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content45% 
IMG OID644936528 
Productprotein of unknown function DUF1080 
Protein accessionYP_003093141 
Protein GI255532769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA GAAAATTAGT TTCACTGTTG CTGTTATTCA GCACGGCAGG TGTGTACGCC 
CAAACAGCGG GCTGGAAAAA TTTATTTGAT GGAAAAACGC TGAAAGGATG GCACCAATTG
AATGGCAAAG CAAAATATGA AGTGATCAAT GGCAGTATTG TAGGTACTAC AGTAACTGCT
GAGCCGAATT CATTTCTGGC TACCAATGAA GACTACGGAG ATTTTATCCT GGAACTGGAA
CTAAAAGTAG GCCAGATGAA TTCCGGCATC CAGTTCAGGA GTTTGTCTGA TCCTGCTGAT
CACAATGGTA GGGTGAGGGG TTATCAGGTA GAAGTTGACC CTTCTGACAG GGCCTGGTCT
GGTGGTATTT ATGACGAAGC ACGACGGGGC TGGATGTACC AGACAGAGAT GCATCCTGCT
GCTAAGAAAG CATTTGTAAA AAAAGGCTGG AACAAGTATA GGATAGAAGC AATAGGACCG
GTGATCAGGA CCTGGGTAAA CGATGTGCCT GTTGCCTATA TGGTGGATGA CATGACTGCG
AAAGGATTTA TTGCCTTACA GGTGCATGGT GTAAAAGAGC GGGCAGGTGG TGCACAGATC
CAATGGCGGA ACATTAAAAT ACAAACGGGT GCTGCTATGA GGCCGAGGCC ATTGGATTTG
TCGGTACCCG TGGCCAATTA TACGCTCAAT ACCCTTTCCC CATTGGAACA GGCCCAGGGT
TTTAGTTTAT TGTTCAATGG AAAAGACCTG AGGGGATGGA GGGCCGTTTT AAAACAAAGC
CCGCCTGAAA AAGGTTGGGA GGTAGAAAAT GGGATATTGC ACATTATGCC TGCTGACAGC
AGCGCAAAAA ATAAATATGG CGACCTGCTC AGCGCCAGGC AATACAAGGC ATTTGAACTG
AACTTCGATT TCAAGTTAAC AGAAGGTGCC AATTCCGGGG TCAAATATTT TGTAATGGAG
TCGGAAAATG CTGCACGCGC CGGCCTGGGA CTGGAATACC AGATATTAGA TGATGAACGC
CATCCCGATG CAAAACTGGG GACTGCGGGG AACCGTACGA TGAGCAGTTT GTATGACCTG
ATTCCGGCCG ATAAGCTGGA TCCACGCTTT AAGAAAAATA TAGGCGAATG GAACCAGGGT
AAGATCATTG TATACCCCAA TAACCTGGTA CAGCATTGGT TAAATGGATT TAAGGTAGTT
GAGTATCAGC GTGGAAGCAA TATCTACAAA GTGCTTGTAG CCCATAGTAA ATTTGCCGGT
AAAGAAGGTT TTGGCCTTGC AGAACGGGGA CCGGTTTTGT TACAGGACCA TGGTAATGCG
GTGTATTATA AAAACATTAA AATAAGGGAA CTTAATTAG
 
Protein sequence
MNIRKLVSLL LLFSTAGVYA QTAGWKNLFD GKTLKGWHQL NGKAKYEVIN GSIVGTTVTA 
EPNSFLATNE DYGDFILELE LKVGQMNSGI QFRSLSDPAD HNGRVRGYQV EVDPSDRAWS
GGIYDEARRG WMYQTEMHPA AKKAFVKKGW NKYRIEAIGP VIRTWVNDVP VAYMVDDMTA
KGFIALQVHG VKERAGGAQI QWRNIKIQTG AAMRPRPLDL SVPVANYTLN TLSPLEQAQG
FSLLFNGKDL RGWRAVLKQS PPEKGWEVEN GILHIMPADS SAKNKYGDLL SARQYKAFEL
NFDFKLTEGA NSGVKYFVME SENAARAGLG LEYQILDDER HPDAKLGTAG NRTMSSLYDL
IPADKLDPRF KKNIGEWNQG KIIVYPNNLV QHWLNGFKVV EYQRGSNIYK VLVAHSKFAG
KEGFGLAERG PVLLQDHGNA VYYKNIKIRE LN