Gene Phep_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2876 
Symbol 
ID8253984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3423795 
End bp3424628 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content47% 
IMG OID644936521 
Productmembrane protein 
Protein accessionYP_003093136 
Protein GI255532764 
COG category[S] Function unknown 
COG ID[COG1470] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.847786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCAA AATTTTCACT TACCCCTCTC TTTTTCCTAT TTCTTTTTGC ATGCCCTCTG 
GCCTTGTGTG CCCAAAGCCC GGCTGTAAAC ATTGATGGTA AATCCGGCTT TACAGCAAAG
CTGATGAATA TCGAGGCTGC AACGAATGAA ATATTTCGTT ACAATGCCAG TTTGCATAAT
GGGTCTGGAA AACCGGCCGT ATTTGAGTTC AAAAGCAATC TGCCCATTGG CTGGATGATC
AGCTACAAGG TTGATGGAAG CCAGGTTACC TCTCTCAATA TGGATCCGGG AAGTACCCGG
GATGTCTCTA TCGAGGTCAA TGCCACAGCA AGTACCGTAC CCGGGAAATA CAAGCTGCCT
GTAAAGGCCA TAACTGCTGC CGATACCCTG TCCCTGAATC TGGAGGCCGT GGTAAAGGGA
TCTTACGGGA TAGCACTGAC CACACCCACC GGAAAGTTAA GCGAAGAGCT TACTTCTGGC
AGCCACAAGG AAATCCATTT GGAGGTAAAG AACACAGGTA CCCTGCCATT GAACGATATT
GAACTCAGTT CCCAATTGCC CAGCAATTGG GAAGCGACGT TTGAGCCCTC AAAGGTTAAA
CAGCTGGAGC CAGGGAAGAA CATAGCCATC ACTGCAAAAC TTAAAGTTCC TGATAAGACG
ATAGCGGGCG ATTATGCAGC TACCTTTACT GCAACAAATA GTAATGGCAA TTCCCAGGCT
GCCTTTAGGA TGGTCGTTAC CACTTCATTG CTATCTGGAT GGATTGGTAT ACTGGTTATT
CTGGCTGCCA TTTCCCTGGT GTATTATCTT ATCCGCAAGT ACGGTAGAAG ATAG
 
Protein sequence
MLAKFSLTPL FFLFLFACPL ALCAQSPAVN IDGKSGFTAK LMNIEAATNE IFRYNASLHN 
GSGKPAVFEF KSNLPIGWMI SYKVDGSQVT SLNMDPGSTR DVSIEVNATA STVPGKYKLP
VKAITAADTL SLNLEAVVKG SYGIALTTPT GKLSEELTSG SHKEIHLEVK NTGTLPLNDI
ELSSQLPSNW EATFEPSKVK QLEPGKNIAI TAKLKVPDKT IAGDYAATFT ATNSNGNSQA
AFRMVVTTSL LSGWIGILVI LAAISLVYYL IRKYGRR