Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2876 |
Symbol | |
ID | 8253984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3423795 |
End bp | 3424628 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936521 |
Product | membrane protein |
Protein accession | YP_003093136 |
Protein GI | 255532764 |
COG category | [S] Function unknown |
COG ID | [COG1470] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.847786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGCAA AATTTTCACT TACCCCTCTC TTTTTCCTAT TTCTTTTTGC ATGCCCTCTG GCCTTGTGTG CCCAAAGCCC GGCTGTAAAC ATTGATGGTA AATCCGGCTT TACAGCAAAG CTGATGAATA TCGAGGCTGC AACGAATGAA ATATTTCGTT ACAATGCCAG TTTGCATAAT GGGTCTGGAA AACCGGCCGT ATTTGAGTTC AAAAGCAATC TGCCCATTGG CTGGATGATC AGCTACAAGG TTGATGGAAG CCAGGTTACC TCTCTCAATA TGGATCCGGG AAGTACCCGG GATGTCTCTA TCGAGGTCAA TGCCACAGCA AGTACCGTAC CCGGGAAATA CAAGCTGCCT GTAAAGGCCA TAACTGCTGC CGATACCCTG TCCCTGAATC TGGAGGCCGT GGTAAAGGGA TCTTACGGGA TAGCACTGAC CACACCCACC GGAAAGTTAA GCGAAGAGCT TACTTCTGGC AGCCACAAGG AAATCCATTT GGAGGTAAAG AACACAGGTA CCCTGCCATT GAACGATATT GAACTCAGTT CCCAATTGCC CAGCAATTGG GAAGCGACGT TTGAGCCCTC AAAGGTTAAA CAGCTGGAGC CAGGGAAGAA CATAGCCATC ACTGCAAAAC TTAAAGTTCC TGATAAGACG ATAGCGGGCG ATTATGCAGC TACCTTTACT GCAACAAATA GTAATGGCAA TTCCCAGGCT GCCTTTAGGA TGGTCGTTAC CACTTCATTG CTATCTGGAT GGATTGGTAT ACTGGTTATT CTGGCTGCCA TTTCCCTGGT GTATTATCTT ATCCGCAAGT ACGGTAGAAG ATAG
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Protein sequence | MLAKFSLTPL FFLFLFACPL ALCAQSPAVN IDGKSGFTAK LMNIEAATNE IFRYNASLHN GSGKPAVFEF KSNLPIGWMI SYKVDGSQVT SLNMDPGSTR DVSIEVNATA STVPGKYKLP VKAITAADTL SLNLEAVVKG SYGIALTTPT GKLSEELTSG SHKEIHLEVK NTGTLPLNDI ELSSQLPSNW EATFEPSKVK QLEPGKNIAI TAKLKVPDKT IAGDYAATFT ATNSNGNSQA AFRMVVTTSL LSGWIGILVI LAAISLVYYL IRKYGRR
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