| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2516 |
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| Symbol | |
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| ID | 8253623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2918605 |
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| End bp | 2920923 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936166 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092782 |
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| Protein GI | 255532410 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.839663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATTT TCCTCATCTT CAGTAGCTTT TATGCCCAGG CACAACAAGG ATATACACTT
GAAGGTATTG TAAAATCTGG TAGTGGAGAA CTACTCACAG GTGCAGGAGT TGTATTGCAG
GGCAGCAATA AATCCTCAGT AACAGACGGA GAAGGGAAAT TCAGCATCAG AAATATTCCT
GCAGGTGAAT ACCGTTTAAA AGTGAAATAT ATTGGCTATG CCGATAGGAT ACAAAAGGTA
ACAATAACAG GTAATACTTC AGGTATACAG CTGGTGTTAA AAGCTAGGGA CAACGACCTT
TCTGAAGTCT CGGTAATCGG GCGGACCGTA GTCCAGGAAA CCAACAGGCA GGCCTTTAAT
GTAACGGCTG TTGATGCTAA AAAACTATAC AACACTACAC TGGATATTTC TGGTGCACTG
GATAGGGTTG CCGGTATACG TGTAAGGGAA TCTGGTGGGG TAGGGTCTAA CTTTAACCTT
TCTTTAAATG GTTTTTCAGG AAATCACATC AGGTATTTTA TTGATGGAAT CCCGATGGAT
AACTTTGGCA GCTCTTTTCA GATCAATAAT ATTCCCATTA ATGTCGCAGA ACGCATAGAA
GTTTACAAAG GGGTAGTACC CATGTGGCTT GGCGCTGATG CGCTTGGTGG GGCCATCAAT
ATAGTAACGG GCGACCGTCA GCGCAATTTT ATAGATGCTG CTTATGCGTA TGGTTCTTTT
AATACGCACA GGACTGTTTT CAATACGGTT GCCACAAGTA AAAGTGGCTT TACTGTACAA
TTGAATGCTT TTCAAAACTA TTCCGACAAT GATTATAAGG TAACGCTCTC TACTATAAAT
ACGGGTGTAA AGGAAGACAT CAAATTGAGA AGATTTCATG ATAACTATCA CAATGAAACA
GTGATTGCAA ACGTCGGACT GGTAGATAAA GGCTTTGCTG ATAAATTATT GTTGGGCATT
ACATTGGGTA AAAATTATAA GGAAATACAA ACCGGCGCAC GCATGGAAGC TGTATTTGGT
GCTTTACACA GACGTGGAAG TATTGTAATG CCTTCTTTGA AGTATAAAAA AACAGACCTG
ATTAAAGGCC TGGATGTTAC GGTGAATGCC AACTACAATT TGGGGTATGA ACAGAATATT
GATACCATGA ATGTAAGGTA CGATTGGTAT GGCGTACCTA AAAATACAGG TACCAGTGGA
GAGCGTGGAA GAACTTTTGC TAAATACAGA AACAATAATG GTTTAGCCAC TGCTATGGTC
AATTATAACA TCAGCGACAA CCAGTCGGTG GCCCTGAACA ATGTTTTTAC TACTTTCAAC
CGTAAGACCA ACGACCTGCT GAACCCGGCA AACAATATCA GTAACCTGCT TAAAAAGACC
TATAAGAACG TACTCGGGCT AGGCTATAGT TATAATGTGA AAGACAGGTG GAGTGTCAAC
TTATTTGGAA AATACATTTA TCAGAACAAT GTTAACGGAA CTGCCGCTAC AGGAGAGTCG
GCCATAGAAA AAATAGGATA CGGTACAGCA GTCACTTATT ATTTCAATTC AAGTTTACAA
CTTAAAGGTT CTTATGAACT CACAAACCGT ATGCCTGAAG CCAACGAGAT ATTTGGCGAC
CTGGAAAATA TGGATGGCAA CCCTGCCTTG AAACCTGAAA AAAGTGACAA CATCAACCTT
GGCCTTATTT ATGGCTTTTC ATTAAATAAA ATACACAATT TTTCCATTAC CGCCAATGCA
ATTTACAGGC AATCGGACCA ATTTATTTAC AATAGACTAA ACCTGAACCA GACCAAACTG
GTGGCCGATA ACCGGGAAGG AGTAAGCACC TGGGGGGGAG ATGCTGAGAT CAGATATTCC
TATAAAGACT GGCTCTCAGC CGGATCTACG TTTACTTATC AGTTTCTGCG CAATCTTCAG
AAATATGAAC CCAATTATAG TGCTGTAAGC CCATTGTATT TAGATCAGAT GCCGAATATT
CCGTATTTAT ATGGAAATGC AGACATCTCT GTATCACTTA AAAATGTTGG AAATAAGAAC
AATAACCTGA GCATTGGTTA TAATTTATTG TATGTACATG CTTTTTGGCT GTACTGGCCC
AGCCTGGGTG GAAAAAGTGC AAATGATGCA AAACGGGAAG TTCCCCAGCA GCTTGCACAT
GACCTGAACT TTGTATACAG CATGGCTAAA GGAAGGTATA ATATCGGACT GGAAGCCAAA
AATCTTACCA ATGAAGACCT TTTTGACAAT TTTAGCCTGC AAAAGCCAGG TCGCGGTTTC
TACCTCAACC TAAGATATTT CTTTAACAAA AACAATTAA
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| Protein sequence | MLIFLIFSSF YAQAQQGYTL EGIVKSGSGE LLTGAGVVLQ GSNKSSVTDG EGKFSIRNIP
AGEYRLKVKY IGYADRIQKV TITGNTSGIQ LVLKARDNDL SEVSVIGRTV VQETNRQAFN
VTAVDAKKLY NTTLDISGAL DRVAGIRVRE SGGVGSNFNL SLNGFSGNHI RYFIDGIPMD
NFGSSFQINN IPINVAERIE VYKGVVPMWL GADALGGAIN IVTGDRQRNF IDAAYAYGSF
NTHRTVFNTV ATSKSGFTVQ LNAFQNYSDN DYKVTLSTIN TGVKEDIKLR RFHDNYHNET
VIANVGLVDK GFADKLLLGI TLGKNYKEIQ TGARMEAVFG ALHRRGSIVM PSLKYKKTDL
IKGLDVTVNA NYNLGYEQNI DTMNVRYDWY GVPKNTGTSG ERGRTFAKYR NNNGLATAMV
NYNISDNQSV ALNNVFTTFN RKTNDLLNPA NNISNLLKKT YKNVLGLGYS YNVKDRWSVN
LFGKYIYQNN VNGTAATGES AIEKIGYGTA VTYYFNSSLQ LKGSYELTNR MPEANEIFGD
LENMDGNPAL KPEKSDNINL GLIYGFSLNK IHNFSITANA IYRQSDQFIY NRLNLNQTKL
VADNREGVST WGGDAEIRYS YKDWLSAGST FTYQFLRNLQ KYEPNYSAVS PLYLDQMPNI
PYLYGNADIS VSLKNVGNKN NNLSIGYNLL YVHAFWLYWP SLGGKSANDA KREVPQQLAH
DLNFVYSMAK GRYNIGLEAK NLTNEDLFDN FSLQKPGRGF YLNLRYFFNK NN
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