Gene Phep_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2193 
Symbol 
ID8253299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2524179 
End bp2524883 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content48% 
IMG OID644935842 
ProductYhhN family protein 
Protein accessionYP_003092459 
Protein GI255532087 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA AACAACCCTG GTTTCATCTC CTGTTTGTTG TTGTCTTTAT CCTGCAGCTC 
CTGTCAGTAT GGAACAGCGC AACTGCACTT GCCGCTTTCA GCAAACCCCT TATTGTCATC
TCCCTGCTCA TCATGCTCAG TGTCAGCACC CGCTTAAAGG GCCGCTTTCA CAAACGGATA
TTTACCGGCT TGGTTTTTGC CCTGGCAGGC GATGTATTGC TGATGTATGC GGCAGGCAAT
GAAAAATTTT TTATATGGGG ACTGGCCGCA TTTCTGCTCT GTCACCTCTT TTATATCCGT
GCTTTTTATC TCGATTTTAA ATCTGCCCCC GAACTGGACA AAAAAGGGGC AAGGATAGCT
ATTTTTTGCT GCGCAATACT GGCCATCAGC TTTTATTTTT ACCTCAGGCC GCAGCTCGGC
ATCATGAAAC TCCCGGTCAT GGTCTATATC CTGGTCATCA GCATGATGAT GATGATGGCC
TGTTTCCGCA ACCAGCGGGT AAACAGCAGC AGCTTTAAGC TCATCCTTTT CGGCGCGCTG
TTTTTCGTGT TTTCTGATGG TATTTTAGCG TATAACAAAT TTGTAAGCCC CATCAGCCAT
TCCGGAGTAT GGATCATGGC CAGCTATATG ATTGCCCAGT ACCTCATCAC CATGGGTGCC
GTGGAACGCA CACTGCTGCA CAATCAGCCC ATACCGGAAG CTTAG
 
Protein sequence
MLKKQPWFHL LFVVVFILQL LSVWNSATAL AAFSKPLIVI SLLIMLSVST RLKGRFHKRI 
FTGLVFALAG DVLLMYAAGN EKFFIWGLAA FLLCHLFYIR AFYLDFKSAP ELDKKGARIA
IFCCAILAIS FYFYLRPQLG IMKLPVMVYI LVISMMMMMA CFRNQRVNSS SFKLILFGAL
FFVFSDGILA YNKFVSPISH SGVWIMASYM IAQYLITMGA VERTLLHNQP IPEA