Gene Phep_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2170 
Symbol 
ID8253276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2495808 
End bp2496926 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content43% 
IMG OID644935819 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_003092436 
Protein GI255532064 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.574954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAC CAGCTAAACA TAAACGCAAG CGCAAACGCT ATTCCTTACC GGTAGCTGGC 
TCCAGTCCGG GTGTTGTATA TATAGATGAA CATGCTTTAC AGCCGCTGAT CAGGTTTCAC
AGTTATAACG ACCATTATTA TGCTGTTAAA GAGCTGGACA ATATTGAAAA CCTGTCGAGG
ATACTGGCCA ACCAGGAATT CAACTACTGG ATAGAAATTA AGGGCTTTGG TTCGGCAGCG
ATGTTTGATA CTTTGAACAA TGATTTCGGG ATCAGCAAGC TTGTGCTGGA AGACATTACC
AGGACTTATC AGCGCCCGAA GCTGGAAGAA TATGGCAAGT ACGATTTTGC CATAAGCAGG
ATGCTCCATT TTGATGAGAA TAAGAACCTG GACAATGAAC AGGTTTCTTT TATTTTAATG
GAAAATGCCC TTTTTACTTT CCAGGAAGGC TATGAAGATT GTCTGGAACC CATCCGTACA
AGGTTAAACG CTGGAAAAGG CAATATCCGC ATTGCGGGCA GCAGCTATCT GATGTATGCC
CTGATGGACA TTATTATTGA CACCTATTTT GAGATTCTGG GCTCATGGGG GGACGAGCTG
GACCTGATAG AAGACCGGCT TTTTGACAAA CCGGACAAAA CAGTTATGTT TGACACCCAG
CTGGTTAAGC GCAACCTGAT CAATGTAAGG CGGGTGGTAT GGCCGGAAAG GGACAAGCTG
AACGATATGC TGAGAAGTGA CAGCAGGCTG ATCACCGATC AGACCAAAAT GTTTATCAGG
GATGCTTATG ACCATTGTAT ACAGATCATC GATATTGTTG AATCTTTAAA AGAGATCTCG
GCCAGTAATA TAGATATGTA TCTATCCATC ATCAGCAACA GGATGAACGA GATCATGAAG
GTGCTGACCA TCATTTCATC CATATTTATC CCCTTAACTT TTATTGCGGG CATATATGGG
ATGAACTTTG CCATACAGGA TCCTGTTACC GGAAAAGTAA TGCCGCAGAA CATGCCTGAG
CTGTACCAGG AACATGGCTA TTTATATACC GTGATTGTAA TGGGGGCCAT TGCTTTGTTA
CAAATCCTAT ATTTCTGGCG TAAAGGATGG TTTAAATAG
 
Protein sequence
MGKPAKHKRK RKRYSLPVAG SSPGVVYIDE HALQPLIRFH SYNDHYYAVK ELDNIENLSR 
ILANQEFNYW IEIKGFGSAA MFDTLNNDFG ISKLVLEDIT RTYQRPKLEE YGKYDFAISR
MLHFDENKNL DNEQVSFILM ENALFTFQEG YEDCLEPIRT RLNAGKGNIR IAGSSYLMYA
LMDIIIDTYF EILGSWGDEL DLIEDRLFDK PDKTVMFDTQ LVKRNLINVR RVVWPERDKL
NDMLRSDSRL ITDQTKMFIR DAYDHCIQII DIVESLKEIS ASNIDMYLSI ISNRMNEIMK
VLTIISSIFI PLTFIAGIYG MNFAIQDPVT GKVMPQNMPE LYQEHGYLYT VIVMGAIALL
QILYFWRKGW FK