| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2125 |
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| Symbol | |
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| ID | 8253231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2446940 |
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| End bp | 2448346 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935774 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_003092391 |
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| Protein GI | 255532019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.957571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC AGACCGAGAA GACCAGTTAT ACCATACCAT TTGCAACTTT GACCACTCTT
TTTTTCATGT GGGGATTTAT TACCTGCATG AACGATGTGC TCATTCCTCA CCTTAAGGAA
CTGTTCAGCC TTACTTACCT GCAATCCATG CTGGTACAGT TTTGCTTTTT CGGGGCTTAC
TTTATTGGTT CAGTCATTTA TTTTGTGACT TCCTATCTGT GGGGCGATCC TATCAATAAG
ATAGGTTATA AAAACGGGAT GTTGCTGGGG CTTCTTATTG CAGCCCTTGG TTGTTTTCTG
TTTTATCCGG CAGCTGTTTT TTCTGCTTAC GGACTTTTTT TAAGTGCATT GTTTATACTC
GGATTGGGTT TTACTTTATT GCAGATTGCA GCAAATCCGT ATGTTTCTTT ATTGGGAAAA
CCGGAGGGCG CTTCCAGTCG TTTAAACCTT GCACAGGCTT TTAACTCGCT GGGCACTACC
ATTGCCCCTG TGATAGGCGG TTTCCTTATT TTTGAGTTTT TTGCGGAGGG CGGTAAGATT
ACAGCAAAGG CCACAGAAAT GCCCTACATT ATCTTTACGG CTGTATTTGT ATTGATTGCT
ATATGTTTGT ATCTCATTAA GCTCCCGGAA TTTAAATCGG AAGAACATAC CGAGAAGGGC
CTGGGTGCCC TGCAGTTTCC ACAACTGAAA CTTGGTATTT TAGGCATATT CTTTTATGTC
GGGGCCGAGG TATGTATCGG TAGCTTCATC ATTAACTTTC TGGCACTTCC TGAAATTATG
GGGATTTCTG AATCGGTGAG CAAAAACTAC CTGGCCTTAT ACTGGGGCGG TTCAATGATT
GGCCGTTTTC TGGGGGCCAT ATCCCTAAAC CAGAACCTGT CGGGCATTAA GAAAGTTGGC
TTTATGCTGG TTGCTGCGGC TGCGGTTTTT CTGCTCATTT CAAGTATAGT AGACCTTAAT
TTTGCTCAGA TCTCAACCTT TTTGATTTTT ATGGGCATTA ACCTGCTTGG TTTCTTTATC
GGCAAGGCAG CACCTGCCCG AACACTGTTG GTTTTTGCAC TGATCAATGT GGTATTGGTG
ATACTTACCA TCGTTAATGC GGGCTCTTTT GCGATGTGGA CAATTATAAG CGTTGGTTTG
TTCAACTCCA TTATGTGGTC AAACATATTT ACACTTTCTA TACATGGATT GGGCAAATAT
ACCAGTCAGG GTTCATCATT ATTGGTAATG GCGATTCTTG GTGGGGCACT GCTTCCATTG
GTACAGGGTG CATTTGCCGA TAGCCTGGGC ATTCATCATT CGTTCTTTGT ACCTGCACTG
GGCTATCTAT ACATCGCTTT TTTTGGATTT TACTGTTCCC GGAAACTGGG TAATGTTAAG
GCTGAAATTA TAGGCGGGGG GCATTAG
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| Protein sequence | MIDQTEKTSY TIPFATLTTL FFMWGFITCM NDVLIPHLKE LFSLTYLQSM LVQFCFFGAY
FIGSVIYFVT SYLWGDPINK IGYKNGMLLG LLIAALGCFL FYPAAVFSAY GLFLSALFIL
GLGFTLLQIA ANPYVSLLGK PEGASSRLNL AQAFNSLGTT IAPVIGGFLI FEFFAEGGKI
TAKATEMPYI IFTAVFVLIA ICLYLIKLPE FKSEEHTEKG LGALQFPQLK LGILGIFFYV
GAEVCIGSFI INFLALPEIM GISESVSKNY LALYWGGSMI GRFLGAISLN QNLSGIKKVG
FMLVAAAAVF LLISSIVDLN FAQISTFLIF MGINLLGFFI GKAAPARTLL VFALINVVLV
ILTIVNAGSF AMWTIISVGL FNSIMWSNIF TLSIHGLGKY TSQGSSLLVM AILGGALLPL
VQGAFADSLG IHHSFFVPAL GYLYIAFFGF YCSRKLGNVK AEIIGGGH
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