Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2024 |
Symbol | |
ID | 8253128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2332965 |
End bp | 2333966 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644935672 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003092291 |
Protein GI | 255531919 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00394379 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGAGC GCACCCCGAA ATCACCACCT AAGATTGAGC CTCTATCTTT AAATGTCTCC AGGCCAAAAT GGTCAGTAAT GATTCCTTCT TATAATTGCA TCCATTATTT ACGTAAAACT ATAGAAAGCG TTTTATTACA AGCCCCTTCT GCAGAAGAAA TGCAGATAGA AGTTATTGAT GATTTCAGTA CTGACGGGGA TGTTGAGGCT CTGGTAAATG AAATTGGTAA AGGGCGAGTA GGTTTTTATA AACAAACGCG GAATGTAGGT AGCCTGCGTA ATTTTGAAAC CTGTATCAAT AGATCCATCG GTACATTGGT TCATATTTTG CATGGGGATG ATCTGGTTAA GCCTGGATTT TATGAAGAAA TAGATGCTTT ATTTAAGAGC TATCCTGAAA TTGGGGCGGC ATTTACCGGT TGTACAGATT TCGATGAAAA CGATAAAGAA ATTTGGGACA GTAAAATCAT CCTTCCTGAA CCTGGAATAA TTGACAACTG GCTACTAAAA ATAGCGCAAG GGCAGCTGCT GCAAACCCCT TGTATTGTAG TTAAACGTAC CGTATACGAA CATCTGGGTA GTTTTTTTGG TGTCCATTAC GGAGAAGATT GGGAGATGTG GACACGAATT GCGGCTCACT ATCCGGTTGC TTATTCTCCT AAGCCACTTG CATTTTACAG AGTTCACAAT AATAATATCA CCAGTAATTC TTTCCGAACA GGGCAAAATA TAAAAGACAT TTCTGCGGTG ATCGACACCA TTCAAAACTA TCTTCCAATA AAGGAAAGAA AAAAACTGAA AAGAAAAGCA AGGGAAAAAT ATGCCTACTA CATCACCATG ATAGCCGATG GCCTTTACCA CAATAATACA GATTCAAAAC CGGCATTATT ACAAACGGCT AAGGCCGTTC GGTTACATCC GAGCAAACAT ACCTTATATT ATTTTTTAAA GATCTCTGTT AAAGTGTTGA TCCGTTATAA AGCTAAACAT CAAAGGAAAT AA
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Protein sequence | MLERTPKSPP KIEPLSLNVS RPKWSVMIPS YNCIHYLRKT IESVLLQAPS AEEMQIEVID DFSTDGDVEA LVNEIGKGRV GFYKQTRNVG SLRNFETCIN RSIGTLVHIL HGDDLVKPGF YEEIDALFKS YPEIGAAFTG CTDFDENDKE IWDSKIILPE PGIIDNWLLK IAQGQLLQTP CIVVKRTVYE HLGSFFGVHY GEDWEMWTRI AAHYPVAYSP KPLAFYRVHN NNITSNSFRT GQNIKDISAV IDTIQNYLPI KERKKLKRKA REKYAYYITM IADGLYHNNT DSKPALLQTA KAVRLHPSKH TLYYFLKISV KVLIRYKAKH QRK
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