Gene Phep_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1997 
Symbol 
ID8253101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2307265 
End bp2307588 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content45% 
IMG OID644935647 
Producthelix-turn-helix domain protein 
Protein accessionYP_003092266 
Protein GI255531894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.285438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000964376 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGATCA TGTACGATAT CAACATCAGC CAAAAGCTGA GGGCTTTACG GAAAAACCGG 
GGCTGGACAC AAAGCGATAT GGCAGCGCAG CTGGACATTT CTGTGCCGGC TTATTCGAAA
ATAGAATGTG CGCAGACGGA ATTGACACTA GGCAGGTTAA AACTGCTTGC TACTATACTG
AAGGTAAAGG TTTGCTGGTT GCTGGACGAA GAAGAAGCGA TGTTGCACCA GGAGAACGAG
GAGCTGAAAG AGAAACTGAG GTTGACCAAT ATAGAAGTGA TGGGCTTGCA GAAAAGATTG
CTGGCTTGTT TTGAACAAAG ATAA
 
Protein sequence
MMIMYDINIS QKLRALRKNR GWTQSDMAAQ LDISVPAYSK IECAQTELTL GRLKLLATIL 
KVKVCWLLDE EEAMLHQENE ELKEKLRLTN IEVMGLQKRL LACFEQR