Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1997 |
Symbol | |
ID | 8253101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2307265 |
End bp | 2307588 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644935647 |
Product | helix-turn-helix domain protein |
Protein accession | YP_003092266 |
Protein GI | 255531894 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.285438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000964376 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGATCA TGTACGATAT CAACATCAGC CAAAAGCTGA GGGCTTTACG GAAAAACCGG GGCTGGACAC AAAGCGATAT GGCAGCGCAG CTGGACATTT CTGTGCCGGC TTATTCGAAA ATAGAATGTG CGCAGACGGA ATTGACACTA GGCAGGTTAA AACTGCTTGC TACTATACTG AAGGTAAAGG TTTGCTGGTT GCTGGACGAA GAAGAAGCGA TGTTGCACCA GGAGAACGAG GAGCTGAAAG AGAAACTGAG GTTGACCAAT ATAGAAGTGA TGGGCTTGCA GAAAAGATTG CTGGCTTGTT TTGAACAAAG ATAA
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Protein sequence | MMIMYDINIS QKLRALRKNR GWTQSDMAAQ LDISVPAYSK IECAQTELTL GRLKLLATIL KVKVCWLLDE EEAMLHQENE ELKEKLRLTN IEVMGLQKRL LACFEQR
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