Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1870 |
Symbol | |
ID | 8252974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2159775 |
End bp | 2162423 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935521 |
Product | Organic solvent tolerance protein OstA |
Protein accession | YP_003092140 |
Protein GI | 255531768 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTTT TACTAACATC TGTTGGTAAC CATGCATTTG CATTTACTTC TTTTTCTTCG TTTCAGGTTG TACAGCAAAT TGATACCGCA AAGAAGGATA CCCTGAAAAA GGGTATAGTT AAAAGTGATC CTAAAGATAC CACTGCATCA GAAAAAATTC AATATGCTGC TAAAGATTCT ATCGCTTTCA GCAAAGATAG CAGTATAGTT TATCTGTACG GTAAGGCCAG GGTAATTTAC CAGGGACTGG AACTGGATGC CGACTACATT ACTTATGACA ACAAAACCCA CCTGATTTAT GCCCGGGGAA CCAAAGATAC AAAAGGAAAA TATATAGGCC GGCCCATCTT TAAAATGGAA GGACAGGGAA CTTCACTGGC CGATTCGCTC AGGTTCAATA CAATTACGAA AGAGGGGAAT ATATATGGAG TTTTTACAGA ACAGGAGGGT GGTTTTTTCT CTGGTGGTAA AGCTAAAAAA CAACCCGATG ATGAAATTCA CAGTAAAGGA CAGACCTATA GTACCTGTAA TTTGCCCCAT CCGCATTATG GTCTGCACAT TACCAAGGGG ATTGTAACAG AAAACCAGAT CATTACAGGG CCGGTGTATT TACAGATAGA AGATATACCC TTGCCTATAG CCCTGCCTTT TGCATTTTTC CCCAAGCCGA ACAAAAGAAG CTCGGGGATT ATCCTGCCCA CACCCGGAGA AGATTATACC AGGGGCTTCT TTTTACAGGA TGGGGGCTAT TACCTGGGCC TCAGCGATTA CTGGGACGCC AGGATAACCG GAAGTATATA TAGCTATGGT TCTTATAATG CCCGGCTTGC CTCTACTTAT ACCCAAAGAT ATAAGTTTAA TGGTAATGTA GACCTGAGCT ATGCTTTTAC CAAGAACGGG ACCAGGGGAA CGCAGGACTT TAGTACCAGT AAAGATTTTA GCATACGATG GAACCATTCA CAAAATGCCA ATGCCAAGCC GGGAACAACA TTTTCTGCAA GTGTTGATGC GGGTACAAGT ACCTTTGACC GGGAGACAGC TGCCGGAGGA ACGTACGATC CAAACCGGAT CGCAAGAAAT ACACTGGGAT CAAGTATCTC TTATGGCCGT ACCTTTGGTC AGGGCATAAA CTTTACAGGC GCCCTGCGCC ATTCGCAGGA AACTGCCACA AAGAGTGTAA GTCTGGTGCT TCCCGATGTC ACGCTGTCTG TGCCCACATT TAACCCTTTT GATTCTAAGG ACAGGGTAGG CGAGCAGAAA TGGTACCAGA AAATAACAGT AGGTTATAAT ATGCAGGCCA CCAACCAGAT CACTTCACCT GATTCTTTAT TGTTTAAAAA AGAATCGCTC AAGAAGTTCA GAAGTGGCTT CCAGCATACC ATTCCTGTTA ACATGGCCTT TAATTTACTG AGGTATTTTA ATTTTAATGT GGGTACTACC TATACGGAAA AATGGCATTT TCAATCGATC AGAAAAACTT ATTTTAAAGT ACCCAACAAA GCAGATGCTA TTTTTATAGA TACCATTCCT GGCTTTAACC GTTCTGGCCA GTATTCCCTC AGCGGGGGAA TGTCGACCAA AATCTATTCT ACTGCCCAGT TTAAAAATTT CGGAAAATTT AAGGCCATCA GACATGTGAT GACCCCAAGT GTGAATTTTA GTTATACCCC TGATTTTTCC GCCCTTAAGC TGGGGAATTA TAAGGAGGCC CTTTATGATG ATAGGACCAA AGTGATGACG CGTGACGCAA AGGGCAACCT GGTACCGCTG CTGTATTCCA TTCATGAATC TTCTTATTAT GGCGGGCCCG GAATGGGAAA AAATGCTTCT ATTGGTTTCT CGGTTGACAA TACAGTAGAA GCAAAATTTT TATCACCAAA AGACACGACA GGCACCGGAG AAAAGAAAAT CCCCATCATT CAGGGATTAG GGATCAGCGG ATCCTATAAC CTGCTTGCCG AAAGCTTTAA ATTATCAACT TTAAGCTTTA GCGGCCGTTC ACAGTTTACA GATAAACTGG GGATAAATTA CTATGGTACT TTAAATCCGT ATTTGTATGC GGATTCCACA GATAAACTGA CAAATAATAC TGTGCGTTAT CTAAAAGATA AATATACCTG GACGGAGGGC AAACTGCCCC GCCTTACCAA TTTTGGTTTC TCTTTTAACT ACAGCCTGAA CCCGGAAGCT TTAAAAAAGA AAAATGATGC GAACGATAAA ATAAAGGAGC AGGCCAATAG TGGTGCCATC ACTCCAGAAC AGGCAGAGGC CCTGGCTAAG GTGAGCCGCG ATCCGAATGC CTTTGTTGAT TTTAACATCC CATGGAATTT TGCCTTCTCT TATACTTTCA ATTACAGTAC CAATGAGGTA AGCCAGAATG GTACAGTTAC CAATACTTTA AACTTTAATG GTGATGCCAA TATTACCCCC AAATGGAAGG TTACATTCAG TTCCGGATGG GACTTTCAGC GCAATACCAT TTCCCAGACC AATTTTTCGA TATACCGGGA TTTACATTGC TGGGACATGA GCTTTAGCTG GGTGCCATTT GGTTTTTACC AGAGCTATTC AGTTGACATT AAAGTGAAGG CCTCTATTCT TCAGGACCTG AAGCTGAGCA AAAGAAAAGG ATATTATACC AAATTTTAA
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Protein sequence | MLVLLTSVGN HAFAFTSFSS FQVVQQIDTA KKDTLKKGIV KSDPKDTTAS EKIQYAAKDS IAFSKDSSIV YLYGKARVIY QGLELDADYI TYDNKTHLIY ARGTKDTKGK YIGRPIFKME GQGTSLADSL RFNTITKEGN IYGVFTEQEG GFFSGGKAKK QPDDEIHSKG QTYSTCNLPH PHYGLHITKG IVTENQIITG PVYLQIEDIP LPIALPFAFF PKPNKRSSGI ILPTPGEDYT RGFFLQDGGY YLGLSDYWDA RITGSIYSYG SYNARLASTY TQRYKFNGNV DLSYAFTKNG TRGTQDFSTS KDFSIRWNHS QNANAKPGTT FSASVDAGTS TFDRETAAGG TYDPNRIARN TLGSSISYGR TFGQGINFTG ALRHSQETAT KSVSLVLPDV TLSVPTFNPF DSKDRVGEQK WYQKITVGYN MQATNQITSP DSLLFKKESL KKFRSGFQHT IPVNMAFNLL RYFNFNVGTT YTEKWHFQSI RKTYFKVPNK ADAIFIDTIP GFNRSGQYSL SGGMSTKIYS TAQFKNFGKF KAIRHVMTPS VNFSYTPDFS ALKLGNYKEA LYDDRTKVMT RDAKGNLVPL LYSIHESSYY GGPGMGKNAS IGFSVDNTVE AKFLSPKDTT GTGEKKIPII QGLGISGSYN LLAESFKLST LSFSGRSQFT DKLGINYYGT LNPYLYADST DKLTNNTVRY LKDKYTWTEG KLPRLTNFGF SFNYSLNPEA LKKKNDANDK IKEQANSGAI TPEQAEALAK VSRDPNAFVD FNIPWNFAFS YTFNYSTNEV SQNGTVTNTL NFNGDANITP KWKVTFSSGW DFQRNTISQT NFSIYRDLHC WDMSFSWVPF GFYQSYSVDI KVKASILQDL KLSKRKGYYT KF
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