| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1846 |
|---|
| Symbol | |
|---|
| ID | 8252950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2136793 |
|---|
| End bp | 2137557 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644935497 |
|---|
| Product | PASTA domain containing protein |
|---|
| Protein accession | YP_003092116 |
|---|
| Protein GI | 255531744 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0407237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.022075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAT TCATTACTTA TCTAAAGACC ACCTCTTTTA GAAATAACCT TATTGCTGCT
ATACTTACAG TTGTGGTAAT TTTACTGGCT GCGTTCTTTA GTTTAAGGTA TTATACCAAA
CATGGACAGG GACTGAATGT TCCCGCTTTA AAGGGACTTG CTTTTACCCA GGCGGTAAGT
AAGCTGGAAG AACTGGGCCT GCGCTATGAG GTCGATTCTG TTTACATCAT GGATTCCCCT
CCGGGCATTG TGGTAGATCA GGATCCGAAT GCCAATACCT TTGTGAAAGA CAACCGTACC
ATTTACCTGA CCATTAATAC AGCTCTTGCC CCTGATTCAA AATTCCCTGA TGTCGAATTT
AAATCTTTAA GAGAGGCCCA GGCATTGATA GAGAGTTTTG GTTTTAAATT GGGAGATACA
ACTTTTAAAG CTGATGTAAG TACAGATGTA CTTCAAGCCT CATTTGGCGG TCAGGTTATT
AAAGCCGGAG AAAAATTACC TAAAGGTTCG CGTATTGATC TGGTACTGGG CAATGGCCAG
GGGGATGAAG AGAGAGAAAT TCCTGTATTA ATCGGTTTAA CAAAAGATGA AGCAATATTT
GCGATCAGAA ATGGTGCCAA GCTAAACCTG GGTATGGTTA CTTACGAAGG GACGATCACA
GATTCTGCAA CAGCGGTTGT TGTTAAACAA ACACCTCTTG CTACCGACTC AGTAACAAAA
GTTAAAGCAG GCACATTGAT AAACATTACG CTTTCAAACA AATAA
|
|---|
| Protein sequence | MGKFITYLKT TSFRNNLIAA ILTVVVILLA AFFSLRYYTK HGQGLNVPAL KGLAFTQAVS
KLEELGLRYE VDSVYIMDSP PGIVVDQDPN ANTFVKDNRT IYLTINTALA PDSKFPDVEF
KSLREAQALI ESFGFKLGDT TFKADVSTDV LQASFGGQVI KAGEKLPKGS RIDLVLGNGQ
GDEEREIPVL IGLTKDEAIF AIRNGAKLNL GMVTYEGTIT DSATAVVVKQ TPLATDSVTK
VKAGTLINIT LSNK
|
|---|
| |