Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1484 |
Symbol | |
ID | 8252585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1761390 |
End bp | 1763234 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935138 |
Product | hypothetical protein |
Protein accession | YP_003091760 |
Protein GI | 255531388 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.100241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.558866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA AACGTTATAT ATTGTCGATG CTTTTATTGT GGACAAGCAC CGTGTTTGCC ACAGCAATAA AGTATGCTGA TGACATAAAG GTAACTGCAT CGGTCAGCAA AAGCCAGGTA GGAACCGGAG AGCATTTTGA AGTTGTCTAT TCCATCAGTG GTAATGGAAA TATTGAGGCT TTAACCCCTC CATCATTTAA CGGTTTCCAG GTGCTGGGTG GCCCTAACCA ATCCTCCAGT TTTACTTCTG TAAATGGAAG AACCTCATCC AGCATGACTT TAAGCTATGA TCTGATGGCG GTTAAAGAAG GAGATTATAC CATTGGCGGG GCTACACTGG TTATAAGCGG GAAGCAGTAT AAAACCAATG CCGTAAAAAT AAAGGTAGTT AAGGGCACTG CAGTTCCCCA AAATGCGCAG GGCAATTCGG GCGGGCGGCA GCCAGACCAG CGGGTAGAAG GCAATGCTTC AAATATAGCC AAACGCTTAT TTATCCGGGC CGTAGCTAAT AAAACCAATG TTTACCAGGG AGAGGGACTT GCCGTAACTT ATAAACTATA TACCAATATT GAACTGGTAG ACAATGCACT GGATAAACTG CCGGATTTTA ATGGTTTCTG GAGTCAGGAG ATCAAAAACA ATGATCCAAA TGTGCGCTGG GAAACAGAAA CTTATCAGGG AAGCCGGTAT AATGTTGCTG TTTTAAAGGA AATTATTCTG TTTCCGGAGC GTTCGGGTAA GTTAACGCTT GATCCACTGG CCATGACTTT TCTGGTCAGA CAACAGGTTT CCTCGGGCGA TTCAAATGAT CCTTTTGACA TGTTCTTCGG ATCGTATAAG GATGTGAAAT ACAAAATAAA AAGTTCGCCG GTTACCATTA ATGTAAAGCC ACTGCCTGAA ACCGGTAAGC CCGAAGGCTT TGAAGGTGCC GTGGGTAATT TTTCTATTGC GGCCATAGTG GATAAGCAGG AACTGAAAGC CAATGAAGCG CTTAACTATA CCTTAAAAAT AACCGGGTCA GGCAATTTAA AATTGTTGAA GGCACCTACA GTAAATTTCC CGGCTGATCT TGAAAAATAC GATCCTAAGC TAACCGACCG CCTGACTGAA AGTCTGAACG GTGTTTCCGG AACCAGGGAA TATGCATATT TACTGATCCC AAGGCACGAG GGCAATTATA CCATCGAACC CTTAAAGTTC TCTTATTTTA ATCCCTCTAC GCAAAAATAT GTGACCTTAT CAACAGGCTC ATTTGATTTA AAAGTAGCAA AAGGTGCACC TGGGTCGAAC GTTACGGCCT ATTCTTCTGC AAATCAGCAG GACATCAAGA TGCTGGCCAA AGACATTACC TATATTAAAA CAGATATGGG CGGCCTGCAT CAGAAAGGAA GTTCTTTTTA CGGATCAACT GCTTATTACC TTTTACTTTG CTGTGGCCCC TTACTGTTTG CCGGTGCATT GGTCTACCGG AAACGATACA GGGAGAACAA TCGTGACCAG GTGGCTGTAC GCGGAAGGAA TGCCAATAAA ATTGCTGCTA AACACTTGGC CAGTGCAAAA AAACAATTGC TGGCCGGCCA AACAACGCTC TTTTATCAGG ATGTTTACAA AGGTTTGTAC CAATACCTGG GCGATAAGTT TAATATTGCA GCTGCAGAAT TGAACAAAGA CAATATCCGT ACGCAACTGT TTGCCAGGGG TATTGACGAA CGTTTGATCA AACAGCTGGA GGAAACACTG GATTTGTGTG AAATGGCCAG GTATGCCCCG GTATCAGGAA TATCCGAACA GGAAGTATTT GACAAAGCAA AGAATACCAT TAATGAGATC GAGACCAATG CATAA
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Protein sequence | MKMKRYILSM LLLWTSTVFA TAIKYADDIK VTASVSKSQV GTGEHFEVVY SISGNGNIEA LTPPSFNGFQ VLGGPNQSSS FTSVNGRTSS SMTLSYDLMA VKEGDYTIGG ATLVISGKQY KTNAVKIKVV KGTAVPQNAQ GNSGGRQPDQ RVEGNASNIA KRLFIRAVAN KTNVYQGEGL AVTYKLYTNI ELVDNALDKL PDFNGFWSQE IKNNDPNVRW ETETYQGSRY NVAVLKEIIL FPERSGKLTL DPLAMTFLVR QQVSSGDSND PFDMFFGSYK DVKYKIKSSP VTINVKPLPE TGKPEGFEGA VGNFSIAAIV DKQELKANEA LNYTLKITGS GNLKLLKAPT VNFPADLEKY DPKLTDRLTE SLNGVSGTRE YAYLLIPRHE GNYTIEPLKF SYFNPSTQKY VTLSTGSFDL KVAKGAPGSN VTAYSSANQQ DIKMLAKDIT YIKTDMGGLH QKGSSFYGST AYYLLLCCGP LLFAGALVYR KRYRENNRDQ VAVRGRNANK IAAKHLASAK KQLLAGQTTL FYQDVYKGLY QYLGDKFNIA AAELNKDNIR TQLFARGIDE RLIKQLEETL DLCEMARYAP VSGISEQEVF DKAKNTINEI ETNA
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