Gene Phep_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1484 
Symbol 
ID8252585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1761390 
End bp1763234 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content43% 
IMG OID644935138 
Producthypothetical protein 
Protein accessionYP_003091760 
Protein GI255531388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.558866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA AACGTTATAT ATTGTCGATG CTTTTATTGT GGACAAGCAC CGTGTTTGCC 
ACAGCAATAA AGTATGCTGA TGACATAAAG GTAACTGCAT CGGTCAGCAA AAGCCAGGTA
GGAACCGGAG AGCATTTTGA AGTTGTCTAT TCCATCAGTG GTAATGGAAA TATTGAGGCT
TTAACCCCTC CATCATTTAA CGGTTTCCAG GTGCTGGGTG GCCCTAACCA ATCCTCCAGT
TTTACTTCTG TAAATGGAAG AACCTCATCC AGCATGACTT TAAGCTATGA TCTGATGGCG
GTTAAAGAAG GAGATTATAC CATTGGCGGG GCTACACTGG TTATAAGCGG GAAGCAGTAT
AAAACCAATG CCGTAAAAAT AAAGGTAGTT AAGGGCACTG CAGTTCCCCA AAATGCGCAG
GGCAATTCGG GCGGGCGGCA GCCAGACCAG CGGGTAGAAG GCAATGCTTC AAATATAGCC
AAACGCTTAT TTATCCGGGC CGTAGCTAAT AAAACCAATG TTTACCAGGG AGAGGGACTT
GCCGTAACTT ATAAACTATA TACCAATATT GAACTGGTAG ACAATGCACT GGATAAACTG
CCGGATTTTA ATGGTTTCTG GAGTCAGGAG ATCAAAAACA ATGATCCAAA TGTGCGCTGG
GAAACAGAAA CTTATCAGGG AAGCCGGTAT AATGTTGCTG TTTTAAAGGA AATTATTCTG
TTTCCGGAGC GTTCGGGTAA GTTAACGCTT GATCCACTGG CCATGACTTT TCTGGTCAGA
CAACAGGTTT CCTCGGGCGA TTCAAATGAT CCTTTTGACA TGTTCTTCGG ATCGTATAAG
GATGTGAAAT ACAAAATAAA AAGTTCGCCG GTTACCATTA ATGTAAAGCC ACTGCCTGAA
ACCGGTAAGC CCGAAGGCTT TGAAGGTGCC GTGGGTAATT TTTCTATTGC GGCCATAGTG
GATAAGCAGG AACTGAAAGC CAATGAAGCG CTTAACTATA CCTTAAAAAT AACCGGGTCA
GGCAATTTAA AATTGTTGAA GGCACCTACA GTAAATTTCC CGGCTGATCT TGAAAAATAC
GATCCTAAGC TAACCGACCG CCTGACTGAA AGTCTGAACG GTGTTTCCGG AACCAGGGAA
TATGCATATT TACTGATCCC AAGGCACGAG GGCAATTATA CCATCGAACC CTTAAAGTTC
TCTTATTTTA ATCCCTCTAC GCAAAAATAT GTGACCTTAT CAACAGGCTC ATTTGATTTA
AAAGTAGCAA AAGGTGCACC TGGGTCGAAC GTTACGGCCT ATTCTTCTGC AAATCAGCAG
GACATCAAGA TGCTGGCCAA AGACATTACC TATATTAAAA CAGATATGGG CGGCCTGCAT
CAGAAAGGAA GTTCTTTTTA CGGATCAACT GCTTATTACC TTTTACTTTG CTGTGGCCCC
TTACTGTTTG CCGGTGCATT GGTCTACCGG AAACGATACA GGGAGAACAA TCGTGACCAG
GTGGCTGTAC GCGGAAGGAA TGCCAATAAA ATTGCTGCTA AACACTTGGC CAGTGCAAAA
AAACAATTGC TGGCCGGCCA AACAACGCTC TTTTATCAGG ATGTTTACAA AGGTTTGTAC
CAATACCTGG GCGATAAGTT TAATATTGCA GCTGCAGAAT TGAACAAAGA CAATATCCGT
ACGCAACTGT TTGCCAGGGG TATTGACGAA CGTTTGATCA AACAGCTGGA GGAAACACTG
GATTTGTGTG AAATGGCCAG GTATGCCCCG GTATCAGGAA TATCCGAACA GGAAGTATTT
GACAAAGCAA AGAATACCAT TAATGAGATC GAGACCAATG CATAA
 
Protein sequence
MKMKRYILSM LLLWTSTVFA TAIKYADDIK VTASVSKSQV GTGEHFEVVY SISGNGNIEA 
LTPPSFNGFQ VLGGPNQSSS FTSVNGRTSS SMTLSYDLMA VKEGDYTIGG ATLVISGKQY
KTNAVKIKVV KGTAVPQNAQ GNSGGRQPDQ RVEGNASNIA KRLFIRAVAN KTNVYQGEGL
AVTYKLYTNI ELVDNALDKL PDFNGFWSQE IKNNDPNVRW ETETYQGSRY NVAVLKEIIL
FPERSGKLTL DPLAMTFLVR QQVSSGDSND PFDMFFGSYK DVKYKIKSSP VTINVKPLPE
TGKPEGFEGA VGNFSIAAIV DKQELKANEA LNYTLKITGS GNLKLLKAPT VNFPADLEKY
DPKLTDRLTE SLNGVSGTRE YAYLLIPRHE GNYTIEPLKF SYFNPSTQKY VTLSTGSFDL
KVAKGAPGSN VTAYSSANQQ DIKMLAKDIT YIKTDMGGLH QKGSSFYGST AYYLLLCCGP
LLFAGALVYR KRYRENNRDQ VAVRGRNANK IAAKHLASAK KQLLAGQTTL FYQDVYKGLY
QYLGDKFNIA AAELNKDNIR TQLFARGIDE RLIKQLEETL DLCEMARYAP VSGISEQEVF
DKAKNTINEI ETNA