Gene Phep_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1196 
Symbol 
ID8252294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1417307 
End bp1418827 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content44% 
IMG OID644934851 
Productphosphoglyceromutase 
Protein accessionYP_003091476 
Protein GI255531104 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA AAAAGCTAGT ACTACTTATT CTTGATGGCT GGGGATACGG AAAAAAAGAC 
AATTCTGATG CAGCTTATGC GGCAAACACC CCTTTTTTTG ATTCTTTATT ACAAAAATGG
CCTAATTCGA AATTAGAAGC CTCCGGTGAA GCAGTAGGTT TACCGGCCGG CCAGATGGGA
AACTCTGAAG TTGGCCACAT GAACCTTGGT GCAGGAAGAA TAGTATATCA GGAACTTGGC
CGGATCAATA AAGCGATCAG CGACAGGACA TTGCATCATA ACCCTGTTTT AACAGCTGCC
TTTAGCTATG CAAAAAACAA CAATAAAGCG GTTCATTTTA TAGGCCTGAC TTCTGATGGG
GGCGTTCATG CCCACATCAA CCATTTAAAG GCTTTGTGTG ATGCGGCAAC AGAACAGGGG
CTGAAAGAAG TGTTTGTACA TGCCTTTATG GACGGGCGCG ATACAGATCC GAACTCGGGG
CTAAATTTTA TTAAAGACCT GGAGCATTAC CTGCAAAATA CCTCAGCTAA AATAGCCAGT
TTGATTGGCC GTTATTATGC AATGGACAGG GACAGCAGAT GGGAAAGGGT TAAACTGACT
TACGACCTGC TTACCCAGGG CATCGGGACA CCGGCTACGG ATCCGGCTAT GGCTATTGAA
CAGTCTTATG CAGCTGGCAT AACGGATGAG TTTATTAAAC CCGTTGTAGT TACACAGTCC
AGCGGACAAC CTGTTGCCAC TATACAACCT GGCGATGTGG TCATCTGCTT TAACTACAGG
ACAGACCGTG GCCGCGAAAT TACGGCAGCA CTTACCCAGA ACGATTATCC TGAATTTGGG
ATGCATAAAC TGCCCTTGTA TTATGTGACC ATGACCACTT ATGATGAAAA CTTTAAAGAT
GTAAAAGTCA TTTTCACCAA AGATGACCTT TCTGAAACCC TGGGAGAAGT TTTAGAGAAA
TACCATAAAA ACCAGATCCG CATTGCGGAA ACTGAAAAAT ACCCGCATGT AACCTTTTTC
TTTTCAGGAG GCCGGGAACA GGTTTTTGAA AACGAAAAAA GGATCATGAT CCCCTCTCCT
AAAGTAGCTA CCTACGATTT ACAGCCTGAA ATGAGCGCAG CGGGAATTAC CGAGGCCATT
TGCAAAGAGC TGGAAACCGG CTGGGCAGAT TTTGTATGCC TGAACTTTGC CAATCCGGAT
ATGGTTGGTC ATACCGGTGT TTTTAACGCA GTAGTTAAAG CTGTTGAAAC GGCCGATAGC
TGCGCTGAAA TTGTGGTAAA CAAAGGTCTT GAAAACGGAT ATTCGTTCAT CATCCTGGCC
GATCACGGAA ATTCTGAATT TATGATCAAC GGGGACGGTT CGGTAAACAC TGCCCATACC
ACCAACCTGG TACCCTGTAT TTTGGTGGAT AAAGATTTCA GCAGTATTGC TGATGGCAAA
CTGGGTGATA TTGCGCCTAC CATTTTAAGC ATTATGGACA TTCCCAAACC GGCAATTATG
ACTGGTAACA GTCTGGTATA A
 
Protein sequence
MNNKKLVLLI LDGWGYGKKD NSDAAYAANT PFFDSLLQKW PNSKLEASGE AVGLPAGQMG 
NSEVGHMNLG AGRIVYQELG RINKAISDRT LHHNPVLTAA FSYAKNNNKA VHFIGLTSDG
GVHAHINHLK ALCDAATEQG LKEVFVHAFM DGRDTDPNSG LNFIKDLEHY LQNTSAKIAS
LIGRYYAMDR DSRWERVKLT YDLLTQGIGT PATDPAMAIE QSYAAGITDE FIKPVVVTQS
SGQPVATIQP GDVVICFNYR TDRGREITAA LTQNDYPEFG MHKLPLYYVT MTTYDENFKD
VKVIFTKDDL SETLGEVLEK YHKNQIRIAE TEKYPHVTFF FSGGREQVFE NEKRIMIPSP
KVATYDLQPE MSAAGITEAI CKELETGWAD FVCLNFANPD MVGHTGVFNA VVKAVETADS
CAEIVVNKGL ENGYSFIILA DHGNSEFMIN GDGSVNTAHT TNLVPCILVD KDFSSIADGK
LGDIAPTILS IMDIPKPAIM TGNSLV