Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0844 |
Symbol | |
ID | 8251938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 995033 |
End bp | 995575 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644934499 |
Product | transcription termination/antitermination factor NusG |
Protein accession | YP_003091128 |
Protein GI | 255530756 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.508276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGTC AGTTGAAATG GTATGTAGTT AGAGCTGTTA GCGGTAAAGA GAAGAAAGTA AAACAGTATA TAGATTCTGA AATCAGTCGT TTAGGTTTTT CTCATCTGGT ACCTCAGGTA CTGATACCGA TGGAAAAATA CTATCAGATG AAGGACGGGA AAAAGATTGC CAAAGAGCGC AACTTTTATC CGGGTTATGT TTTGATAGAA GCTATTTTAG ATGGAGAATT GGAACACATT ATTAAGAATA TTAATAGTGT GATTGGCTTT TTAGGGGATA AGGGCGGAAA TCCGGTTCCT ATGCGCCAGG CGGAAGTTAA CCGTATTTTA GGTAAAGTTG ATGAGATGAG CCAGCAAGGT GAAACCATGA ATGTTGCTTA TTATGTTGGA GAGAACGTTA AGGTTATGGA TGGACCATTT AATGGTTTTA CCGGCGTTAT TGAAGAGGTT AATGAAGAGA AGAAAAAATT AAAAGTTATG GTTAAGATTT TTGGAAGGAA AACTCCGCTG GAACTTAACT ATATGCAGGT AGAAAAAGAA TAA
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Protein sequence | MDGQLKWYVV RAVSGKEKKV KQYIDSEISR LGFSHLVPQV LIPMEKYYQM KDGKKIAKER NFYPGYVLIE AILDGELEHI IKNINSVIGF LGDKGGNPVP MRQAEVNRIL GKVDEMSQQG ETMNVAYYVG ENVKVMDGPF NGFTGVIEEV NEEKKKLKVM VKIFGRKTPL ELNYMQVEKE
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