| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0660 |
|---|
| Symbol | |
|---|
| ID | 8251748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 767370 |
|---|
| End bp | 769646 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934309 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_003090944 |
|---|
| Protein GI | 255530572 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01340] aconitate hydratase, mitochondrial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTG ATATAGAAAT GATCAAAAAG GTGTATGCAA ACTTTGGCCC CCGTGTAGAG
GCGGCCCGTA AATTAGTAGG CAGACCTTTA ACACTTTCAG AAAAAATACT TTATACCCAC
CTTTGGGATG GCACTGCAAA TACTTCTTAC AACAGGGGTG TGGATTATGT AGATTTTGCT
CCTGACCGTG TGGCCATGCA GGATGCTACT GCACAAATGG CTTTACTGCA GTTTATGCAG
GCAGGCAGAC CTCAGGTAGC GGTTCCTTCT ACCGTTCATT GCGATCACCT GATTACAGCT
AAACTTGGTG CAGCAATTGA TTTACCTGCT GCAAATACAG AGAGTAAAGA AGTTTTCGAC
TTTTTAGCAT CTGTTTCTAA CAAATATGGT ATTGGTTTCT GGAAACCAGG AGCAGGTATC
ATCCACCAGG TGGTGCTGGA AAATTATGCT TTCCCGGGTG GAATGATGAT TGGTACCGAC
TCACATACCG TTAACGCGGG TGGCTTGGGT ATGGTTGCCA TTGGTGTTGG TGGTGCTGAT
GCCTGCGATG TAATGGCTGG TTTGCCTTGG GAACTTAAAT TCCCTAAACT GATTGGTGTT
AAATTAACCG GAAAGCTGAA TGGCTGGGCC TCGCCAAAAG ATGTAATCCT TAAGGTTGCA
GGTATCTTAA CTGTAAAAGG TGGCACTGGC GCCATCGTTG AATATTTTGG TGACGGTGCA
ACAGGCATGA GCTGTACAGG TAAGGGCACC ATCTGTAACA TGGGTGCTGA AATTGGCGCA
ACCACTTCTA CTTTTGGATA CGACGAGAGC ATGGAGCGTT ATTTACGTGC AACAAACAGG
GCAGATGTGG CTGATGCTGC AAATGCAGTC AAAGAACACC TGACCGGTGA TGCAGAAGTA
TATGCAGAAC CTGAAAAATA TTTTGATCAG CTGATCGAGA TCAACCTTTC TGAACTGGAA
CCCTACCTGA ACGGTCCTTT TACGCCGGAT CTGGCTACCC CTATTTCTAA AATGAAAGAG
GTTGCAGCAG CAAACGGCTG GCCGTTAAAA GTAGAATGGG GCCTGATCGG TTCATGTACC
AATTCATCTT ACGAAGATTT GTCGAGAGCC GCATCTATTG CCAAACAGGC CATCGACAAA
GGTTTAACTA CCAAGGCCGA CTTCGGGATC AATCCCGGAT CGGAGCAGGT ACGCTATACA
GCGAACCGCG ACGGTTTATT AAAAACTTTT GAAGATCTGA ATGCTACCAT CTTTACCAAT
GCCTGCGGAC CATGTATTGG GATGTGGGAC AGAGTTGGTG CCGAAAAACA AGAGAAAAAT
ACCATTGTAC ACTCGTTTAA CAGAAATTTT GCCAAACGTG CCGATGGTAA CCCCAATACT
TTTGCTTTTG TGACCTCTCC GGAAGTTGTG GCTGCAATTG CTATTGCCGG CGATCTTAGT
TTTAATCCTT TAACTGATAC TTTAACCAAT AATAAAGGCG AACAGGTTAA ATTAGATCCG
CCAAAAGGTG ATGAACTGCC AGTAAATGGT TATGCTGTTG AAGATGCGGG TTATCAGGAG
CCAGCTGCAG ATGGCAGCGG TGTACAAGTG CTTGTTTCTC CTACTTCGCA CAGGTTGCAA
TTGCTTGATC CGTTTACACC ATGGGAAGGC ACGGACCTTA AAGGCCTGAA ACTCCTGATC
AAAGCAAAGG GAAAATGTAC AACAGACCAC ATCTCTATGG CTGGCCCATG GTTAAAATTC
CGTGGCCACC TGGACAACAT TTCCAACAAC ATGCTGATCG GTGCTGTAAA CTTCTTTAAC
GACAAAACTG ACAACGTTAA GAATGAACTG ACTGGCGAAT ATGGTCCGGT TCCGGCAACA
CAACGTGCTT ATAAAGCAGC AGGAATAGGT TCTATTGTAG TAGGTGATGA AAACTATGGT
GAAGGTTCAA GCCGCGAGCA CGCAGCTATG GAGCCACGTC ACCTTGGTGT ACGTGCCGTA
CTGGTAAAAT CTTTTGCCCG TATCCATGAA ACCAACCTTA AAAAACAAGG TATGCTCGGT
TTAACATTTG CCAATAAGGA CGATTACGAT AAGATCCTGG AAGACGACAC TATCGACATT
GTAGGTTTGA CAACTTTTAG CCCTAATGTT CCCTTAACAC TGGTATTGCA CCATGCTGAC
GGTTCTAAAG AGGAAATTTC TGTTAACCAC AGCTACAATG CACAACAGAT TGAATGGTTT
AAAGCAGGTG GTGCACTAAA TATCATCCGC AGAGAAGCTG CTGCTAAAAA CGCATAG
|
|---|
| Protein sequence | MAFDIEMIKK VYANFGPRVE AARKLVGRPL TLSEKILYTH LWDGTANTSY NRGVDYVDFA
PDRVAMQDAT AQMALLQFMQ AGRPQVAVPS TVHCDHLITA KLGAAIDLPA ANTESKEVFD
FLASVSNKYG IGFWKPGAGI IHQVVLENYA FPGGMMIGTD SHTVNAGGLG MVAIGVGGAD
ACDVMAGLPW ELKFPKLIGV KLTGKLNGWA SPKDVILKVA GILTVKGGTG AIVEYFGDGA
TGMSCTGKGT ICNMGAEIGA TTSTFGYDES MERYLRATNR ADVADAANAV KEHLTGDAEV
YAEPEKYFDQ LIEINLSELE PYLNGPFTPD LATPISKMKE VAAANGWPLK VEWGLIGSCT
NSSYEDLSRA ASIAKQAIDK GLTTKADFGI NPGSEQVRYT ANRDGLLKTF EDLNATIFTN
ACGPCIGMWD RVGAEKQEKN TIVHSFNRNF AKRADGNPNT FAFVTSPEVV AAIAIAGDLS
FNPLTDTLTN NKGEQVKLDP PKGDELPVNG YAVEDAGYQE PAADGSGVQV LVSPTSHRLQ
LLDPFTPWEG TDLKGLKLLI KAKGKCTTDH ISMAGPWLKF RGHLDNISNN MLIGAVNFFN
DKTDNVKNEL TGEYGPVPAT QRAYKAAGIG SIVVGDENYG EGSSREHAAM EPRHLGVRAV
LVKSFARIHE TNLKKQGMLG LTFANKDDYD KILEDDTIDI VGLTTFSPNV PLTLVLHHAD
GSKEEISVNH SYNAQQIEWF KAGGALNIIR REAAAKNA
|
|---|
| |