Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0554 |
Symbol | |
ID | 8251641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 658648 |
End bp | 661119 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644934203 |
Product | hypothetical protein |
Protein accession | YP_003090839 |
Protein GI | 255530467 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.195396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0453352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC TTATCTTCGT TCTATTATCT GTAGTCACAG CACTATCTGC GAAAGCTCAG GAGAATGATC ATGGCGCTGA GCAATTAAAA AAGCAGCTAT CCCTTTTCTT AACCCATCAC CCATCCAGCA ATCTTTATCT GCAACTGGAT AAGAACATTT ATTCACCCGA AGAAACCATC TGGTTCAAGG CGTACCTGCT CTCTGATACC GTTACTGCCA ACAAAGTATT ATATGTGCGC ATTACCGACG AGGATAAAGA AATAGTGCTC AACGCCCAGT TTCCCATGTA CGATATCCGC TCGCATGGCG ATATTCAGCT GCGCAGCAAT CTGGAAGAGG GCAAATACAC CCTTTATGCC TATACCGACC GAATGATCAG CTATGGAGAT ACGAATGTGT TTGTGCAGCG CATTCAGATT AAAAAGATGA CCGGCAAGAA ACTGGAAGCC GAGGCCCAGG TAAGCGACAC CACCCAACTG GTAAGAGGCG GTAAGGTGCA AGTGGTGACT GTTATCCGTG AAAGCGGCAA ACCGGCAAAA AACGTTAAAG GCGAATACGA GCTGCTTGCA GGAGAAAAAG CCATTAAATA CGGCAGGTTG AGTACCAATT TGTTTGGCGA AGCCTTTATC AATTTCACTT ACCCGGAACT AAAAGACAAT CAGTCGCTGA AAATCAATAT GCTCTTTTGC CGGGATAATG ATTACGCCGA GCTGTCGCTG AATCTGCCCC ATGAAGGCAA TCCGCTGAAA GTAAGTATTT ATCCCGAAGG CGGACAGCTA CTGGCTGGTG TCAGCGGCAA AGTAGCCATC GAAGTACTGG ATATCCATCA GAATCCGATA CCTACCGAAC TGCTGGTAAA AAACGCGGGT CGACTTATAG CCAAATTAAG AACCAATAAA CAGGGAATCG CTACCCTGAG CCTGAAGCCT GAGCTTGGTG CCACTTATAC TGTAGAAACA GCAGGCAAAA AGAAGCAAAC AATTGCCTTT CCAGAAATTA TAAAACCCGC AGGCTATAGC CTAAAGCTGC ACAGGAATAA AGAAGAGATA GAAGTAACGG TCTACAATAA AAACAAAGCA GGCAATGCCT TACTGGTACT TCGCTCAGCA AAAGAAGTGC TGTGGAGTCA ATCCTTAAAG ATTCCACCGG ACGACTCGGT AAAAGTCACT ATACCGGCAG CAGGTTTCCC CAAAAATATC CTGAGCCTGG CGGTACTTGA CGGGGAGAAT AAACCGCAGA CAGAGCGTCT CTTTCTGAAT AAAGCCCAGG AAGATTATAG GGTAAGCATC AGCACCGACC GGAAAGATTA CGGCCTTCAA AAGAAAGTGA CAGTTACTGT AAAGATATCC GATACCCGGG GTAATCCCGT TGTGGCTAAT CTTGCAGTAG GAGCTACGGA AAAGAACCGG ATCGACAGCG CGGGTTACCG GACCATTTTA CAGTCCTGGT ATTACCATCC CTTTGAGCAT GCCAGCAGGA ACAGGTTGCT GTCGGCCAAA TCAGCAAACG AGACGGACGC TTTACTGATG GCAAACACCT GGGGCAACAA CCAGTGGAAA ACCATCAGTG ATTACCAGCC CACAAGCCCT CCATTGCGCC TGGATAATAC AGATGCTGCA ATTGGAATGG TGATACCGAC CGGTAAGAAG GAGATAGAGG AGATTGACAT CAAATCCACC GATATTAATT TCTCTCTAGC GGAGTTAAAC AAAAGAAATA TTCTCCAAAC CAGGCGATTT ACCATTAAAC TCGATAAAAA TAGGATGTTT ATGATACCGG CTTCTGAACT GTTGTCCCGT AAAGGGAAAG AATGGATGTT GGATATATAC AAAGTAATAA AACCTGCTCC CCAGGTCAAT TTTGAGGTGC AATGGAAGGA TCATGATATC CATTATGATA ACATTGTAGT AAAAGGAAGA TCACTATTCG TGCCGGAAAT TGTAACCTTT TTTTCGAGGC TCAAAAATCC TGGGGTATCT GATTTCAAAA TGAACGGGAT AAACCAATTA GCAGAAGTTA CTGTAGGGGG TAAAGATGAG ATAATCAGAA AGAGGCTAAA AGATAAATGT GCAGATTGGG TGTGTGGATA CAATAACATT AATTGTTCAA GACATCCCAC AGGTACCAAA CCAGTAAAGG GCCAAACTTA TTTTAAAAGG TCTAAAGGCA TAGTGAACCT AGTCACCAAT ATAGGTTGCG ACAACTACAG AGATGTCAGT TATATCAAAA ATATCACCAT TCCGGAGGAG TTTTATTTGC CCGATTATGA TAGTGCACCA TTTGGAAAAT TCGATCCCCG TTCCACTATT TACTGGAACC CTAATTTGGT TACCGATGCA AACGGAACGG CAACATTTAG TTTTTTTACC TCAGACATTA TGGGCGAATT TGAGATCATA GCCCAAGGAC TGGAAGTAAA TACTTTTACA CCGTTAATGG GGAAAGGAAA TTTTAAAGTT GCTGGTCAAT GA
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Protein sequence | MKQLIFVLLS VVTALSAKAQ ENDHGAEQLK KQLSLFLTHH PSSNLYLQLD KNIYSPEETI WFKAYLLSDT VTANKVLYVR ITDEDKEIVL NAQFPMYDIR SHGDIQLRSN LEEGKYTLYA YTDRMISYGD TNVFVQRIQI KKMTGKKLEA EAQVSDTTQL VRGGKVQVVT VIRESGKPAK NVKGEYELLA GEKAIKYGRL STNLFGEAFI NFTYPELKDN QSLKINMLFC RDNDYAELSL NLPHEGNPLK VSIYPEGGQL LAGVSGKVAI EVLDIHQNPI PTELLVKNAG RLIAKLRTNK QGIATLSLKP ELGATYTVET AGKKKQTIAF PEIIKPAGYS LKLHRNKEEI EVTVYNKNKA GNALLVLRSA KEVLWSQSLK IPPDDSVKVT IPAAGFPKNI LSLAVLDGEN KPQTERLFLN KAQEDYRVSI STDRKDYGLQ KKVTVTVKIS DTRGNPVVAN LAVGATEKNR IDSAGYRTIL QSWYYHPFEH ASRNRLLSAK SANETDALLM ANTWGNNQWK TISDYQPTSP PLRLDNTDAA IGMVIPTGKK EIEEIDIKST DINFSLAELN KRNILQTRRF TIKLDKNRMF MIPASELLSR KGKEWMLDIY KVIKPAPQVN FEVQWKDHDI HYDNIVVKGR SLFVPEIVTF FSRLKNPGVS DFKMNGINQL AEVTVGGKDE IIRKRLKDKC ADWVCGYNNI NCSRHPTGTK PVKGQTYFKR SKGIVNLVTN IGCDNYRDVS YIKNITIPEE FYLPDYDSAP FGKFDPRSTI YWNPNLVTDA NGTATFSFFT SDIMGEFEII AQGLEVNTFT PLMGKGNFKV AGQ
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