| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0351 |
|---|
| Symbol | |
|---|
| ID | 8251436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 412844 |
|---|
| End bp | 414805 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644933999 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090637 |
|---|
| Protein GI | 255530265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG CAATCCTGTT TTTTACCCTT TACATGGCCC TGATCCCCAT TGCCCATGCA
CAAAAAAATG TCCAGGTAAG CCCGCTTCCC GATCAGAGTG GTTTTACCGT TGAAAGTAAG
ACCAAAGACC TGGGCGGCGG TTTTTACGAT CATGGTGTTG CCTCGCCCAT CAGCAATCAC
CGTGGCGTGG TCGCAACCGT AGATGGCCAG GGCCGCAACA TTGTCCTGGT CTGGCTTTTT
GACCACCGTG GTGGCTATGC CTTATTGATG ATTGATGCGC TGACCGGCAA AAGTGAAGAA
TTCCCGGTCC CTTTTGACAC CAAGGGGGAT ACACCATTTT CCTCCATCTT GTCTGAAGGG
AACAAACTCT ATAGCCTTTA TGGCTCCCAC TTTGTAGAAT TTGATCCCGT ATTAAGGAAA
TTTACCTTTG TGAGCAAGGC CACGCCACAA ATGGCAATGT CCATGACCGC CGATGATGAC
GGCAGGATCT GGGCGGCAAC TTATCCCAGC AGCGGCCTGG TTTCTTTTGA TCCCAGAACC
CGTGAGTTTA AAGATTATAA ATCTGTAAAC AAAGAAAAAT GGGCACAATA CCCGAGGTCG
ATCACAGCAG ATGACAGCGG CTGGATCTAT TTTGGGCTAG GCAATGCCGC CAGCCAGATT
TTTGCTTTTA ATCCCGTATC TGCCGAAATT ACAAGCATAC TCCCCCCGGC AGAAAGAAAA
TTAGGCATAG CGTCTGTATC CAGGGATTTA AACGGAAAAG TTTATGGACA AAGCCTGAGC
AGCGGAGACG GCCCCTGGTA TGAACTGTAC AAAGGCAAAG CGAACAAGGT GGGGCAATAC
CAGACACGGA AACCAAAACC TGTTATTACA GGTTCACAAG TACTTGTTCA TGATAAATTT
CCGGATGGCA GCCTGCTGAA AAGCCTGGAC CTGGTAAACA GGGTGCTGGT TACCGAAAAC
CCGGGAACCA GGAAAAAAAA CACTGTGACC TTTAATTATT CCAGCGATGG CGCGATTGTA
ATGGGCGTGG GTACTGCACC AGATGGGACT ATAGTAGGTG GTACAGCTTT TCCGATGCGC
TTTTTTAATT ACGATTTGAA AAACGACAAT TGGGTAAACC GCCCTGCCCT GGGGCAGTTT
AATGCACTGG CAAACCAGAA CAACAAAGTG TTTTTCGCGG TATATAACGG GGGCTACCTG
ATAGACTGGA ACCCCTTTCA ACCCTGGAAA GGCTGGCCAA AAAAAGGTAC TGTTTCCAAC
CCCCAGTATC TCTCCGTAGC ATCACCTACT GTCATCAGGC CATTCCGGCT GGTGGCCCAT
CCCGATGGAA AAACAATGAT CATGAGCGGC AGTCCGGAAT ATGGTGCTAC AGGCGGCGGC
CTGTTGTTTT GGGACGATAA GACCAAGCAA CAGAAATTGC TTACCGACAA AGAAGTAGTG
CTGGACCAGT CGACCATGAG CATTGTGCCC CTTAAAAATG GCAAAATACT CGGTGGCACC
ACTACCACGC CAGGTTCCGG TGGCGAAAAG AAGGCTACCG AAGCCGTAGT GTACATCATG
GACATGGGCA GCAAAAAAAT AGAATGGCAA AAGGCCCTGT TCCCTCAGGC ACAGGAATAC
AGCGACATGC GCTTAATGCC CAATGGGATG GTTTACGGCA TTAAAGATAA AAAGGTATTT
TTTGTATTCG ACCCGGCGAA AAAACAGGTT ATCCATGAAG AAGACCTGCT GCCTAAATAT
GGCCGTACAA CCGCAGAGCA AAGCCCGAGG ATATTTGTTG AAGGACCTAA AGGTGAAATG
TACCTGCTTT TCAACGATGG GGCAATTGTA CAGATCAATC CCGACAATTA TAACCTAAAA
CTGATTGCTA CTTCCCCATC AAACATCAAA GCTGGCGGGG ATTATGCCAA TGGCCGGATT
TTCTTTGTCA GCGGTTCTCA TTTGTTCAGT TACAAACTGT AA
|
|---|
| Protein sequence | MKQAILFFTL YMALIPIAHA QKNVQVSPLP DQSGFTVESK TKDLGGGFYD HGVASPISNH
RGVVATVDGQ GRNIVLVWLF DHRGGYALLM IDALTGKSEE FPVPFDTKGD TPFSSILSEG
NKLYSLYGSH FVEFDPVLRK FTFVSKATPQ MAMSMTADDD GRIWAATYPS SGLVSFDPRT
REFKDYKSVN KEKWAQYPRS ITADDSGWIY FGLGNAASQI FAFNPVSAEI TSILPPAERK
LGIASVSRDL NGKVYGQSLS SGDGPWYELY KGKANKVGQY QTRKPKPVIT GSQVLVHDKF
PDGSLLKSLD LVNRVLVTEN PGTRKKNTVT FNYSSDGAIV MGVGTAPDGT IVGGTAFPMR
FFNYDLKNDN WVNRPALGQF NALANQNNKV FFAVYNGGYL IDWNPFQPWK GWPKKGTVSN
PQYLSVASPT VIRPFRLVAH PDGKTMIMSG SPEYGATGGG LLFWDDKTKQ QKLLTDKEVV
LDQSTMSIVP LKNGKILGGT TTTPGSGGEK KATEAVVYIM DMGSKKIEWQ KALFPQAQEY
SDMRLMPNGM VYGIKDKKVF FVFDPAKKQV IHEEDLLPKY GRTTAEQSPR IFVEGPKGEM
YLLFNDGAIV QINPDNYNLK LIATSPSNIK AGGDYANGRI FFVSGSHLFS YKL
|
|---|
| |