Gene Pfl01_5035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5035 
Symbol 
ID3713691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5672240 
End bp5673166 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350763 
Protein GI77461256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0505791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGA TTCACATCGG TATTTCAGGC TGGCGTTACG CCCCGTGGCG CGGGGACTTT 
TACCCCAAGG GGCTGGCGCA GAAACGCGAA TTGCAGTTCG CCTCACGGGC GGTCAACAGC
ATCGAAATCA ACGGATCGTT CTACGCCCTG CAACGGCCCG AACGCTACGC CCAGTGGTAC
GCCGAAACGC CGGATGACTT CGTGTTCAGC ATCAAGGCGC CCCGCTTCAT CACCCACATC
CGCCGCCTGC GCGATATCGA GAAACCCCTG GCCAATTTCT TTGCCTCCGG GGTGCTGGAA
TTGAAGGAAA AATTCGGCCC GATCCTCTGG CAGTTCCCGC CCAACTTCAC ATTCGACCCC
GAACGTTTCG AAGCCTTTCT CGACCAGTTG CCCCACGACA CCCAGGCTGC CGCCGACCTC
GCCCGCCAGC ACGATTCACA CCTGCACGGC CATGCGAGCA TGAAGGCCTA CGGCAAAAAA
CCGCTGCGCC ATGCCGTGGA AATCCGCAAC GACAGTTTCA TCGACCCCGA CTTCGTGCGC
CTGCTCAAAC GCTACAACAC CGCGCTGGTG ATTGCCGACA CCGCCGGGAA ATGGCCGTAC
CGCGAAGACC TGACCAGCGA TTTCGTCTAC CTGCGCCTGC ACGGTGCCGA AGAGCTCTAC
GCCAGCGGTT ACACCCGTGC AGCGCTGCAA CGCTGGGCCG AACGGATCGA TGCCTGGCAC
CATGGCCGGC AACCGCGCGA TGCCCATTTG ATCGCGCCGC GCCTGAAACC TCGGGCCCGC
AAATCCCGCG AGGTTTTCTG CTACTTCGAC AACGACATCA AGGTTCGCGC GCCTTTCGAT
GCCCGCAGCC TTTTGCAGCG CTTCGATCTG GATAAACACC TCGAAACCGT GCCCGGTGAA
CTGCCCGCCG ATGGAGTACT CGCATGA
 
Protein sequence
MATIHIGISG WRYAPWRGDF YPKGLAQKRE LQFASRAVNS IEINGSFYAL QRPERYAQWY 
AETPDDFVFS IKAPRFITHI RRLRDIEKPL ANFFASGVLE LKEKFGPILW QFPPNFTFDP
ERFEAFLDQL PHDTQAAADL ARQHDSHLHG HASMKAYGKK PLRHAVEIRN DSFIDPDFVR
LLKRYNTALV IADTAGKWPY REDLTSDFVY LRLHGAEELY ASGYTRAALQ RWAERIDAWH
HGRQPRDAHL IAPRLKPRAR KSREVFCYFD NDIKVRAPFD ARSLLQRFDL DKHLETVPGE
LPADGVLA