Gene Pfl01_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4848 
Symbol 
ID3716848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5467603 
End bp5468157 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID 
Productgeneral secretion pathway protein H 
Protein accessionYP_350576 
Protein GI77461069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.966259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC AGGGTTTCAG TCTGGTCGAA CTGCTTATGG GACTGGCGAT CGGCGCAATT 
GTTCTGTCGC TGGTCAGTCC GGCGCTGGCG GACCTCACCG AATCAAACCG GCGGCAGCTG
GCCGCGCAGT CTTTGCTCGA CGGGATCCGC AATGCCCGGA CCATGGCCAT CACGCGCAAC
CAAAGCGTGG TGATTCATGG CATCAACGGT GATTGGGGCC AAGGCTGGCG GATCATTCTG
GATATCAGCG GAAAGGGTCC GGGAGATGCC GGTAATCCCT TGCTGATCGA GCAGGCGAGT
GACGCAAAGA TACCGATTGT CGGCAACTGG CTGGTGAGCC GCTACATACG CTTCAGCAGC
CTGGGCCAGC CACTGGTGCC GGACCGGAAA TTTCAGGCGG GGACGTTACA TCTATGCTCG
GCTCGCGAGC CGGTAAGCCA GCTCCAGGTG GTGCTGGCGG CAACCGGTCG CGTACGCCTG
GTCAGTCAAA AGGCTGAACA GGCGCTGTGT CGAAAGGATA AAGCGATCAG ATCGAGCGAA
CGCGCAGCTC TTTAG
 
Protein sequence
MPQQGFSLVE LLMGLAIGAI VLSLVSPALA DLTESNRRQL AAQSLLDGIR NARTMAITRN 
QSVVIHGING DWGQGWRIIL DISGKGPGDA GNPLLIEQAS DAKIPIVGNW LVSRYIRFSS
LGQPLVPDRK FQAGTLHLCS AREPVSQLQV VLAATGRVRL VSQKAEQALC RKDKAIRSSE
RAAL