Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4848 |
Symbol | |
ID | 3716848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5467603 |
End bp | 5468157 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | general secretion pathway protein H |
Protein accession | YP_350576 |
Protein GI | 77461069 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.966259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCAAC AGGGTTTCAG TCTGGTCGAA CTGCTTATGG GACTGGCGAT CGGCGCAATT GTTCTGTCGC TGGTCAGTCC GGCGCTGGCG GACCTCACCG AATCAAACCG GCGGCAGCTG GCCGCGCAGT CTTTGCTCGA CGGGATCCGC AATGCCCGGA CCATGGCCAT CACGCGCAAC CAAAGCGTGG TGATTCATGG CATCAACGGT GATTGGGGCC AAGGCTGGCG GATCATTCTG GATATCAGCG GAAAGGGTCC GGGAGATGCC GGTAATCCCT TGCTGATCGA GCAGGCGAGT GACGCAAAGA TACCGATTGT CGGCAACTGG CTGGTGAGCC GCTACATACG CTTCAGCAGC CTGGGCCAGC CACTGGTGCC GGACCGGAAA TTTCAGGCGG GGACGTTACA TCTATGCTCG GCTCGCGAGC CGGTAAGCCA GCTCCAGGTG GTGCTGGCGG CAACCGGTCG CGTACGCCTG GTCAGTCAAA AGGCTGAACA GGCGCTGTGT CGAAAGGATA AAGCGATCAG ATCGAGCGAA CGCGCAGCTC TTTAG
|
Protein sequence | MPQQGFSLVE LLMGLAIGAI VLSLVSPALA DLTESNRRQL AAQSLLDGIR NARTMAITRN QSVVIHGING DWGQGWRIIL DISGKGPGDA GNPLLIEQAS DAKIPIVGNW LVSRYIRFSS LGQPLVPDRK FQAGTLHLCS AREPVSQLQV VLAATGRVRL VSQKAEQALC RKDKAIRSSE RAAL
|
| |