Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4482 |
Symbol | |
ID | 3717741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5054086 |
End bp | 5055078 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_350210 |
Protein GI | 77460703 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.116288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTC TGGTCACCGG CGCAAGCGGC TTCATTGGCG GACGCTTTGC GCGTTTCGCC CTGGAGCAGG GCCTGGAGGT GCGGGTCAAC GGTCGCCGGG CCGAGGGTGT CGAGCATCTG GTACGTCGCG GTGCCGAGTT CGTTCAAGGC GATCTGAGCG ATCCGGATCT GGTGCGTGCG CTATGCAGCG ATGTCGAAGC CGTGGTGCAT TGCGCCGGCG CGGTCGGCTT GTGGGGCCGT TATCAGGACT TCCATCAGGG CAACGTGCAA GTCACCGAAA ACGTGGTCGA GGCCTGCCTG AAACAACGGG TTCGGCGGCT GGTGCATCTG TCGTCGCCCT CGATCTACTT TGACGGTCGC GACCACCTCG GCCTGACCGA AGAGCAAGTG CCCAAGCGCT TCAAGCATCA CTATGCCGCG ACCAAATACC TGGCCGAGCA AAAGGTCTTC GGCGCCCAGG AATTCGGCCT CGAAACCCTC GCTCTGCGCC CGCGTTTCGT CACCGGCGCC GGCGACATGA GCATCTTCCC GCGCTTGCTG AACATGCAGC GCAAAGGTCG TCTGGCAATT ATCGGCAACG GCCTGAACAA GGTCGATTTC ACCAGCGTGC ACAACCTCAA CGAAGCATTG CTCAGCAGCC TGCTGGCCGA TGCCTCCGCG TTGGGCAAAG CCTACAACAT CAGCAACGGC GCTCCGGTGC CGCTGTGGGA TGTGGTCAAT TACGTGATGC GCAAGATGGA AGTCCCACAG GTCACCCAGT ACCGTTCCTA CGGTCTGGCC TACAGCGTGG CGGCGCTCAA CGAAGGGGTG TGCAAGCTCT GGCCCGGGCG TCCCGAGCCG ACCCTGTCGC GCCTGGGCAT GCAGGTGATG AACAAAAATT TCACCCTCGA CATCAGTCGC GCCCGGCATT ATCTGGACTA CGATCCGAAA GTCAGTCTGT GGACGGCTCT CGATGAGTTC TGCAGTTGGT GGAAAGCCCA GGACATTCGT TGA
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Protein sequence | MKILVTGASG FIGGRFARFA LEQGLEVRVN GRRAEGVEHL VRRGAEFVQG DLSDPDLVRA LCSDVEAVVH CAGAVGLWGR YQDFHQGNVQ VTENVVEACL KQRVRRLVHL SSPSIYFDGR DHLGLTEEQV PKRFKHHYAA TKYLAEQKVF GAQEFGLETL ALRPRFVTGA GDMSIFPRLL NMQRKGRLAI IGNGLNKVDF TSVHNLNEAL LSSLLADASA LGKAYNISNG APVPLWDVVN YVMRKMEVPQ VTQYRSYGLA YSVAALNEGV CKLWPGRPEP TLSRLGMQVM NKNFTLDISR ARHYLDYDPK VSLWTALDEF CSWWKAQDIR
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