Gene Pfl01_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4297 
Symbol 
ID3713995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4854847 
End bp4855560 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content49% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_350025 
Protein GI77460518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.202378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.883789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTT CGAAAGAAAA AACTGGCTGG AGTGATGAGG AGCTAGAAGC TTCTGTAGAC 
GCTTATCTAA AAATGCTGGT TCTTGAACAA CAAAATCAGC CATTCAATAA AGCGGACGAG
AATCGACTCT TGCGAAAAGG CCCGCTGAGC AAACGCAGTG CCTCGTCAGT CGAGTACCGC
ATGCAGAACA TCTCTGCTGT GATGGATTTA ATGGGACTGC CGAGAATTAC AGGCTATGTT
TCGGCGAAGA ATCTCGGCTC CGGTGTCATT ACGCGTATCA AAGAGATCCT GGCTAAAAAA
GACATGGAAG CGATACGAAA CAGCTCACGA AGAGGCACTC AGCTGACTCG ATTCCGGCTG
ATCGAACCTT CCGCACCTGA ATTGAATGAT GCGCCCCCGG GTGTACTCAA CCCGAAGCAG
ACTAGCGCGA CGGTAGTTAG GCTTTCGCGC AAATTAAATG TGAAAAAATG GGTTCTGAAA
CGTTCTCAAG GTATTTGCGA AGGGTGTGGC CAAAAAGCGC CATTCCAAGA TGCTGATGGC
AAACCTTTTC TTGAAGTTCA TCATCTGAAA CATCTCGTTA ACGGGGGGAC AGACCGTACG
AGCAACGCAG TAGCCCTCTG CCCGAACTGC CATCGACGTT GCCATTACTC GAGCGACAAA
GAAGAGTTCA CTGCTAAGTT TTATAGGAGC GTCGAGGGGT TAGAGGCTGA ATAG
 
Protein sequence
MDTSKEKTGW SDEELEASVD AYLKMLVLEQ QNQPFNKADE NRLLRKGPLS KRSASSVEYR 
MQNISAVMDL MGLPRITGYV SAKNLGSGVI TRIKEILAKK DMEAIRNSSR RGTQLTRFRL
IEPSAPELND APPGVLNPKQ TSATVVRLSR KLNVKKWVLK RSQGICEGCG QKAPFQDADG
KPFLEVHHLK HLVNGGTDRT SNAVALCPNC HRRCHYSSDK EEFTAKFYRS VEGLEAE