Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4297 |
Symbol | |
ID | 3713995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4854847 |
End bp | 4855560 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | HNH endonuclease |
Protein accession | YP_350025 |
Protein GI | 77460518 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.202378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.883789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACTT CGAAAGAAAA AACTGGCTGG AGTGATGAGG AGCTAGAAGC TTCTGTAGAC GCTTATCTAA AAATGCTGGT TCTTGAACAA CAAAATCAGC CATTCAATAA AGCGGACGAG AATCGACTCT TGCGAAAAGG CCCGCTGAGC AAACGCAGTG CCTCGTCAGT CGAGTACCGC ATGCAGAACA TCTCTGCTGT GATGGATTTA ATGGGACTGC CGAGAATTAC AGGCTATGTT TCGGCGAAGA ATCTCGGCTC CGGTGTCATT ACGCGTATCA AAGAGATCCT GGCTAAAAAA GACATGGAAG CGATACGAAA CAGCTCACGA AGAGGCACTC AGCTGACTCG ATTCCGGCTG ATCGAACCTT CCGCACCTGA ATTGAATGAT GCGCCCCCGG GTGTACTCAA CCCGAAGCAG ACTAGCGCGA CGGTAGTTAG GCTTTCGCGC AAATTAAATG TGAAAAAATG GGTTCTGAAA CGTTCTCAAG GTATTTGCGA AGGGTGTGGC CAAAAAGCGC CATTCCAAGA TGCTGATGGC AAACCTTTTC TTGAAGTTCA TCATCTGAAA CATCTCGTTA ACGGGGGGAC AGACCGTACG AGCAACGCAG TAGCCCTCTG CCCGAACTGC CATCGACGTT GCCATTACTC GAGCGACAAA GAAGAGTTCA CTGCTAAGTT TTATAGGAGC GTCGAGGGGT TAGAGGCTGA ATAG
|
Protein sequence | MDTSKEKTGW SDEELEASVD AYLKMLVLEQ QNQPFNKADE NRLLRKGPLS KRSASSVEYR MQNISAVMDL MGLPRITGYV SAKNLGSGVI TRIKEILAKK DMEAIRNSSR RGTQLTRFRL IEPSAPELND APPGVLNPKQ TSATVVRLSR KLNVKKWVLK RSQGICEGCG QKAPFQDADG KPFLEVHHLK HLVNGGTDRT SNAVALCPNC HRRCHYSSDK EEFTAKFYRS VEGLEAE
|
| |