Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3785 |
Symbol | |
ID | 3714717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4283783 |
End bp | 4284766 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | putative FecR |
Protein accession | YP_349514 |
Protein GI | 77460007 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.744864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGATA CTCGTGATTG CGCGTGCGGG CAAACAACGG TGCGCGATGA CGCGGCACGC TGGTTTGTGC GTTTGCAGGA GCCGGCCGTC AGTGCCGACG AACAGCAGCG CTTCGATGCG TGGCTGAACG AACATCCCCA GCACCGTGAC GAATTCCAGT TGCTGCAAGG CTTGTGGTCA GCGGCGGATC TGCTGCCGGC GCCACGGCTT AAAGCTTTGT GCGAAACCCC GCCGGCGCGG CGCGAGCGCC GACCGTTGTT GCGTTATGCC GTGGCGGCCA GCGTGGTCGC GGTGGCGCTC GGGCTCGGCC TGTTCAGCGG CCTGAATCAC CCGCAAGGTT ACAGCGCCGA ATTCGCCACC GCGTTGGGCG AGCGCAAGCA TGTGGCGCTG CCGGACGGCT CGATGATCGA CCTCAACAGC CGCAGCCGTT TGCAGGTGCG TTTCGAAAAG GATCGGCGGC TCATCGAGCT GACCGAAGGC GAAGCGATGT TCAGCGTCGA GCACGACACG TCCCGCCCGT TCGTGGTCGA GGCCGGCAGC GGCAAGGTCA CGGTCACCGG CACCCGTTTC GATGTGCGGC GCGACGTGAC CCAGACCCGG GTCGCGGTGG AGCAGGGCAC GGTCAAGGTG CAGGGCCGGG ATGCGGCCGA TGCCGATTTC ATCAGCCTCA CTGCCGGCCT CGGCACGCGG GTCGATGCCC AGGGCAAAGT GGCGCCAGCC TACGCGGTCA CCCCGGCGGA ACTGACGGCC TGGCGCAGCG GCAGACTGGT GTTCAACAAC GCCAGCCTCA GCGAAGTTGT CGAGGAAGTG TCGCGTTATC GCGACAAGCC GCTGAAAGTC GCCAACCCGG CCGTGGCCAA TTTGCGCCTG ACCAGCGTGT TCAAATCCGA CAACACCGAT GCCTTGCTCA AGGCCTTGCC GAGCATCCTT CCGGTGGCCG TGCGCACCCT TGCCGACGGC AGCCAGGAAA TAATTTCAAA ATAA
|
Protein sequence | MMDTRDCACG QTTVRDDAAR WFVRLQEPAV SADEQQRFDA WLNEHPQHRD EFQLLQGLWS AADLLPAPRL KALCETPPAR RERRPLLRYA VAASVVAVAL GLGLFSGLNH PQGYSAEFAT ALGERKHVAL PDGSMIDLNS RSRLQVRFEK DRRLIELTEG EAMFSVEHDT SRPFVVEAGS GKVTVTGTRF DVRRDVTQTR VAVEQGTVKV QGRDAADADF ISLTAGLGTR VDAQGKVAPA YAVTPAELTA WRSGRLVFNN ASLSEVVEEV SRYRDKPLKV ANPAVANLRL TSVFKSDNTD ALLKALPSIL PVAVRTLADG SQEIISK
|
| |