Gene Pfl01_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3416 
Symbol 
ID3713424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3897826 
End bp3898368 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349145 
Protein GI77459638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.437478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA CACCGCTGGA TCTGCAGCAG GATGACAAAC ACCTCAAGGG GCGATTGCAG 
AACGGCCAGC TCGACGGCCC GTTGAACATC AAGGATGACG GGCGCCCGCA GGCGGATCTG
AATTACAGCC AGGGCGAATT GCAGGGTACG TCCCTGCTCT ATCACCCCAA TGGCAAGGTT
TCGGCGCAGA TGCCGTTTGT GCGCGACAAG CTGCAAGGCA TCGCCAGTTT CTACGCGCCC
GAGGGCTGGT TGCAGCGCAA GGCCGCCTAC CGGCGCGGAC TGTTGCATGG TGAGGCGTTC
AATTACTTTC CCGACGGGCA AGTGGCGGAG GCCGAGTTCT ATCGCGATGG CGTGCGTGAG
GGGCGCTATC AGCGCTTTCA TCCCAACGGC AAGCCGGCGG TGGATGCGCG TTATCTGAAT
GGGCAGTTGA TGGAGCCGGA GCAAGGGTTT GCCGAGGACG GGCGGCCGCT GGATGCCGAT
GGCAAACCGA TTTCCCGGGT GCGCTGGTGG TTTCGCAAAT GGACGGATCC GGCGCAGGCC
TGA
 
Protein sequence
MAITPLDLQQ DDKHLKGRLQ NGQLDGPLNI KDDGRPQADL NYSQGELQGT SLLYHPNGKV 
SAQMPFVRDK LQGIASFYAP EGWLQRKAAY RRGLLHGEAF NYFPDGQVAE AEFYRDGVRE
GRYQRFHPNG KPAVDARYLN GQLMEPEQGF AEDGRPLDAD GKPISRVRWW FRKWTDPAQA