Gene Pfl01_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3308 
Symbol 
ID3713182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3788986 
End bp3789549 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_349037 
Protein GI77459530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.38656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACAAAG ATTCTGTTCA GCGGGCTTCG GTCCTGCAAC ACGTCAGCCA GAACGTTCGG 
CGCCTGCGCC ACGCCGCCGA CATGAGCCAG ACAGCCCTCG CGGAAAAGTC CGGGGTCAGC
CGGCGAATGC TGGTGGCCAT CGAGGCCGGC GAGAAGAATG TCAGCCTGAC CACCCTCGAC
CGCGTCGCCG AAGCCCTCGA AGTGGCCTTC AGCGATCTGA TCCAGGCCCC GGACAATCGC
GATCCGGGCC GTATCAACGA ACTGGCCTGG GCTGGCAGCA TCCCCGGCAG CAAAGCCGTT
TTACTGTCCA AGGCCAATGC CACTCGCGCG GTGGAACAGT GGGAATGGTG CCTGCAACCG
GGCGAGGTCT ATCCCTCGCA ACCGGACGCC GACGGCTGGA GCGAGCAGAT TTTCGTGTTT
GAAGGCTGCC TGACGTTGAT GCTCGGCGAC CAGCCACAGC ACATTGCCGC CGGGGAGTTT
TACATGTTCG CCAGTAATCA GCCGCACGCC TATCGCAATG ATGGGGAAGT GGCGGTGCGT
TTCGTGCGTA ATGTGGTGAT CTGA
 
Protein sequence
MHKDSVQRAS VLQHVSQNVR RLRHAADMSQ TALAEKSGVS RRMLVAIEAG EKNVSLTTLD 
RVAEALEVAF SDLIQAPDNR DPGRINELAW AGSIPGSKAV LLSKANATRA VEQWEWCLQP
GEVYPSQPDA DGWSEQIFVF EGCLTLMLGD QPQHIAAGEF YMFASNQPHA YRNDGEVAVR
FVRNVVI