Gene Pfl01_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3145 
Symbol 
ID3712870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3610318 
End bp3611370 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content59% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_348874 
Protein GI77459367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.47265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA AAAACATGCG TCTGGCAGTA TCCGGTCTGG CCCTGAGTTG TTTCACCGCG 
TTCGGCGCCC ACGCCGCCGA GCCCAAGCAA TTGTTCTTCT ACAACTGGAC CGATTACTAC
CCGGTGGACC TGCTGGCCAA GTTCGAAAAG GAGACCGGGA TCAAGGTCAC CATGGACGGC
TACGACAGCA ACGAAACCCT GCTCGCCAAA TTGCAGGCCG GCGGCGCGGC GTATGACGTG
ATCGTGCCGT CGCAGTCGAT CATGCAGACG CTGATCAAGC AGGACCTGCT GCTGGAAATC
GACGCTCCGA CCCTGAGCAA CTTCCAGTAC GTCAAAGGCC CGTTCCGCGA TCCGAGCTTC
GACCCGGGCC GCAAGTTTTC GGCGCCGTAC CTGTGGGGCA CCACCGGGTT TTCCTATGAC
AGCGCACGGG TACCGGGCGG CAAGCTCGAT GATTCGTGGA AAGAATTCTT CGAACCGCGC
AAGGAACTGC AAGGCCAGCT CGCCGCCCTC GACACTTCCA GCAGCGTGAT CAACGCCGCC
AGTCATTACC TGAACGTCGA CGAATGCACG GAAAACCCGC AGGAGGCCAA ACGCATCCTC
GAACTGCTGC AAAAACAGAA ACCGTTTTTG AAGATGTACA GCTCCGACAA CACCGTCGAC
CGCATGGCCT CGGGCGAAGT GATCATGATG CAGAACTGGA ACGGCTCGAC GGCCCGCGCC
ACGTTGCAGA AGAGCACGAT CAAATACGTG TACCCGAAAG AAGGCCTGGC GATGTTCCAG
GACAACTTCG CCGTACCGAA AAGCGCTCCG CATCCGGGCA ACGCGAGGAT CTTCATCGAC
TGGATGATGA AGCCCGAGAA CGCGGCGGCC GTGTCCAACG CGATTGCCTA TGCCAACGGG
ATTCAGAGCG ATCAGTTGCT GGATGCGAAA TGGAAGGTCA TGGACGCGAT CAACATGCCC
GAGGAATACG CCTCGCGCCT GCGGCCGGAG AAGGAATGCA GCAACAAGGC GCGGGAGCTG
CAGGATCGGA TCTGGTCGAA GCTCAAGGGT TGA
 
Protein sequence
MKVKNMRLAV SGLALSCFTA FGAHAAEPKQ LFFYNWTDYY PVDLLAKFEK ETGIKVTMDG 
YDSNETLLAK LQAGGAAYDV IVPSQSIMQT LIKQDLLLEI DAPTLSNFQY VKGPFRDPSF
DPGRKFSAPY LWGTTGFSYD SARVPGGKLD DSWKEFFEPR KELQGQLAAL DTSSSVINAA
SHYLNVDECT ENPQEAKRIL ELLQKQKPFL KMYSSDNTVD RMASGEVIMM QNWNGSTARA
TLQKSTIKYV YPKEGLAMFQ DNFAVPKSAP HPGNARIFID WMMKPENAAA VSNAIAYANG
IQSDQLLDAK WKVMDAINMP EEYASRLRPE KECSNKAREL QDRIWSKLKG