Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3037 |
Symbol | |
ID | 3712721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3473891 |
End bp | 3474946 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | fimbrial protein |
Protein accession | YP_348766 |
Protein GI | 77459259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.130146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.538691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCGGC TAACGTACGC AGCTCATTGG CCGATACGTA AAGCCCTCTT CATGAAGCGT TTCCAGCCCC AGCGCCCTAC CCCGATCACG AAATTGATTC ACACGCTGTG CCTGACGCTG CTCTTCGCGT CCAGCTACGC TGGCGCGGCT AATTGCTCGT TCTACCCAAA ACATCATCAA ACAATTCTCA CTATGCAAGT ACCCGCTACA CTTTCCATTC CTCGTGACAC ACCTAACGGC ACCTTAATAT ATGAAAGTCC GCCAATCACA CTCGGCCCTA CGCCCAGCTC ATACAAATGC ACTAACGAGT TTTCATATGG TGTTTTGAAC AGCGTCGGCG TGTCTAAATC GGGCGACCTT GTTTACGCGA TAGGAAACAC TGGACTTGCA TGGCAGTGGT CTTTCAAAGA CAACATAACC ATACCCATTT ATCCAGGCAT TCAGCGGGAA GCGGGCGGAT ACGGATGGGA CACCACAAGA CATGTGCTAC GACTATTCAA AATAGCGGAT GTAATCGATG TACAGAAAAT CCCGGCAGGA ACACTTGGGA CTTTTCATGC AGATGGAGTG TCACCACTCG CAATGGCGAC CAATGGCACA ACGATTGTGC CTCAATCCTG TGAAACGCCT GACATCAAAG TAGACATGGG GGCGCATGAC ATGAGTAGCT TTGGCCAAAA CGGCGCCTAT TCTGAGCCGA TCAAATTTGA CATCAACCTT AACAACTGTC CGTCAGGCAT AAATAAAGTA ACTTATATGC TCAAGCCTAC CCTGACGTCT CCTTCGCAAA ACTCCACGAG GGGCATCGTA AAGTTGAGTG CAGATTCAAC TGCCCAGGGT GTGGCTTTGC AAATACTCAA TAGTGATGGG ACCCCGCTCG TTTTACATCA AAGCTATGTG TTCACGGACT ATCCCGCTGC GGGAGGTAAC TTGAAGATCC CCCTCAGCGC TCGATACTTT CGCATCGCTG AAACAGCTGG CAATGGCGGG TTTGACAAGG GCATGCGCGC CGGAACAGCC AACGCAACAA TTGCCTTTGT CATGAGTTAC TTGTGA
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Protein sequence | MSRLTYAAHW PIRKALFMKR FQPQRPTPIT KLIHTLCLTL LFASSYAGAA NCSFYPKHHQ TILTMQVPAT LSIPRDTPNG TLIYESPPIT LGPTPSSYKC TNEFSYGVLN SVGVSKSGDL VYAIGNTGLA WQWSFKDNIT IPIYPGIQRE AGGYGWDTTR HVLRLFKIAD VIDVQKIPAG TLGTFHADGV SPLAMATNGT TIVPQSCETP DIKVDMGAHD MSSFGQNGAY SEPIKFDINL NNCPSGINKV TYMLKPTLTS PSQNSTRGIV KLSADSTAQG VALQILNSDG TPLVLHQSYV FTDYPAAGGN LKIPLSARYF RIAETAGNGG FDKGMRAGTA NATIAFVMSY L
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