Gene Pfl01_3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3037 
Symbol 
ID3712721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3473891 
End bp3474946 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content50% 
IMG OID 
Productfimbrial protein 
Protein accessionYP_348766 
Protein GI77459259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.130146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.538691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCGGC TAACGTACGC AGCTCATTGG CCGATACGTA AAGCCCTCTT CATGAAGCGT 
TTCCAGCCCC AGCGCCCTAC CCCGATCACG AAATTGATTC ACACGCTGTG CCTGACGCTG
CTCTTCGCGT CCAGCTACGC TGGCGCGGCT AATTGCTCGT TCTACCCAAA ACATCATCAA
ACAATTCTCA CTATGCAAGT ACCCGCTACA CTTTCCATTC CTCGTGACAC ACCTAACGGC
ACCTTAATAT ATGAAAGTCC GCCAATCACA CTCGGCCCTA CGCCCAGCTC ATACAAATGC
ACTAACGAGT TTTCATATGG TGTTTTGAAC AGCGTCGGCG TGTCTAAATC GGGCGACCTT
GTTTACGCGA TAGGAAACAC TGGACTTGCA TGGCAGTGGT CTTTCAAAGA CAACATAACC
ATACCCATTT ATCCAGGCAT TCAGCGGGAA GCGGGCGGAT ACGGATGGGA CACCACAAGA
CATGTGCTAC GACTATTCAA AATAGCGGAT GTAATCGATG TACAGAAAAT CCCGGCAGGA
ACACTTGGGA CTTTTCATGC AGATGGAGTG TCACCACTCG CAATGGCGAC CAATGGCACA
ACGATTGTGC CTCAATCCTG TGAAACGCCT GACATCAAAG TAGACATGGG GGCGCATGAC
ATGAGTAGCT TTGGCCAAAA CGGCGCCTAT TCTGAGCCGA TCAAATTTGA CATCAACCTT
AACAACTGTC CGTCAGGCAT AAATAAAGTA ACTTATATGC TCAAGCCTAC CCTGACGTCT
CCTTCGCAAA ACTCCACGAG GGGCATCGTA AAGTTGAGTG CAGATTCAAC TGCCCAGGGT
GTGGCTTTGC AAATACTCAA TAGTGATGGG ACCCCGCTCG TTTTACATCA AAGCTATGTG
TTCACGGACT ATCCCGCTGC GGGAGGTAAC TTGAAGATCC CCCTCAGCGC TCGATACTTT
CGCATCGCTG AAACAGCTGG CAATGGCGGG TTTGACAAGG GCATGCGCGC CGGAACAGCC
AACGCAACAA TTGCCTTTGT CATGAGTTAC TTGTGA
 
Protein sequence
MSRLTYAAHW PIRKALFMKR FQPQRPTPIT KLIHTLCLTL LFASSYAGAA NCSFYPKHHQ 
TILTMQVPAT LSIPRDTPNG TLIYESPPIT LGPTPSSYKC TNEFSYGVLN SVGVSKSGDL
VYAIGNTGLA WQWSFKDNIT IPIYPGIQRE AGGYGWDTTR HVLRLFKIAD VIDVQKIPAG
TLGTFHADGV SPLAMATNGT TIVPQSCETP DIKVDMGAHD MSSFGQNGAY SEPIKFDINL
NNCPSGINKV TYMLKPTLTS PSQNSTRGIV KLSADSTAQG VALQILNSDG TPLVLHQSYV
FTDYPAAGGN LKIPLSARYF RIAETAGNGG FDKGMRAGTA NATIAFVMSY L