Gene Pfl01_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3027 
Symbol 
ID3712711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3463882 
End bp3465264 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348756 
Protein GI77459249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGC TTCTCGCACG ACCATGGTTG GGCGCGATGA GTCTGTTGCT CTGTGGACTG 
CTCGCCATGG CTACTCATGC CCACGCAGCC GAGGGCGATT ACCGCCTGGG CACTCAAGGC
GAAGTACTCG ACGACCGAGT GATGTACACC ATTGGTGGCG GCTCGACAGT CGGCTCACCG
AGTTCGCTCT ACCGACCCAG CGGTCTCGGT GTCGGCGGGT CCTGGCGCGC GAACATGATG
TGCGGAAACA TGAGCCTCAC CAACACCCTG CAAAACCAGC TGAACGGCGT CACCGAAGGT
TTCCAGCAGA TCATGGGCAG CATCGTGCAG AACGCGACCC AAGCGGTGAT GTCGCTGCCG
GCGTTGATCA TCCAGCGCGC CAACCCCGGT CTCTATGAGT TGCTCAGTAA CGGGGTGATG
CAGGGGCGCA TCGACTTCGA TCGTTCCAAG CTGACCTGCC AGGCCATGGC AGAGAAGATG
GCGGACAAAG TTGGTCAAGC CGGTTGGGGT GCGCTGGCCA AAAACCAGGA GATGCAGGTC
AATCTGGAGC AAACCGGCGG TGATGCGGTG GCAGCGGTGA AAAACACCGA GGCCCATAAC
GGCAACAATG GGGTGTCCTG GGTCGGCGGT TCGAAGGCCG GAGGGAACGG ACAGACGCCC
ATTCGAGTGA CCGCCGACGT GGTCCGTGCA GGCTATAACC TGCTGCATAA CCGGTCGGTG
GATGACAGCG CCTCGATCAG TAGCAGCGAC TGCTTAGGCG GGGCTATTTG CCAGACATGG
ACCTCGCCCC AAGAGGAATC CGAATGGGCC GTTCGGGTGT TGGGCGAGAC CGAAGTCGCG
ACCTGCGACA CATGCGAAAC CCTGCGTGCT ACCGCTGGCA GTGGATTGAC GCCGTTGATT
CAGGAGGCCT ATAGCGAACG CCTGAAGGCC CTGCAGGAGT TGCTGTCTGG CTCTCTCCCG
CCTACCCCTG ACAACCTGGC TAAAGCCTCC AGCCCGATGT TACCGGTGAC CCGAGGCGTG
GTCGAAGCCC TGCGTGACGA TCCCGACCAG GATCTGCTGG CACGGCGTTT GGCCAGTGAG
ACTGCCCTGT CCAGCGTACT CGACAAGGCG TTGCTGCTAC TGCGTACGCT ACTGGCGGGC
AGTCACGAAC CGAACATCGC CTCCGCCGAA CCGGCCCAGA TCGCCTTGAC GAAAAACATC
GACGCCTTGG AGCGCGAAAT TCGCCTGCTG CAGACCGAGC TGCAGGTCAG GCAGATGCTG
ACGACCAATA CCGCCAGCCT GGTGCTCGAC CGGCATGCCG GTGGCGCTGA TGCTTCGCGC
ACCGTCGAGC AAGGCGACCC TGAGCCCGGT CGACTTAATG ATGCTGACAC CAGGCGCAAG
TGA
 
Protein sequence
MSRLLARPWL GAMSLLLCGL LAMATHAHAA EGDYRLGTQG EVLDDRVMYT IGGGSTVGSP 
SSLYRPSGLG VGGSWRANMM CGNMSLTNTL QNQLNGVTEG FQQIMGSIVQ NATQAVMSLP
ALIIQRANPG LYELLSNGVM QGRIDFDRSK LTCQAMAEKM ADKVGQAGWG ALAKNQEMQV
NLEQTGGDAV AAVKNTEAHN GNNGVSWVGG SKAGGNGQTP IRVTADVVRA GYNLLHNRSV
DDSASISSSD CLGGAICQTW TSPQEESEWA VRVLGETEVA TCDTCETLRA TAGSGLTPLI
QEAYSERLKA LQELLSGSLP PTPDNLAKAS SPMLPVTRGV VEALRDDPDQ DLLARRLASE
TALSSVLDKA LLLLRTLLAG SHEPNIASAE PAQIALTKNI DALEREIRLL QTELQVRQML
TTNTASLVLD RHAGGADASR TVEQGDPEPG RLNDADTRRK