Gene Pfl01_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2793 
Symbol 
ID3714534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3217164 
End bp3218480 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content56% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionYP_348524 
Protein GI77459018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGACCT TGCCCTCCAA GACCTCCCTG CGCCGGGCCG TTACCGGCCC GATGCTTTTT 
CTATTTATTC TCGGCGATGT GCTCGGGGCG GGCGTTTATG CTCTTGCCGG GACAATTGCA
GGGGAGGTGG GTGGCGCAAT ATGGATGCCG CTGCTGATTG CTCTTTTTTT CGCGATGCTT
ACTGCAGGTT CCTATGCCGA GTTGGTGACA AAATATCCCC ACGCGGGCGC CGCTTCGGTT
TTCGCCGAGA AAGCGTTCGG GTCACCGCTC ATTTCTTTTC TCGTGGGCTT TTGCATGCTA
TCTGCAGCTG TCACGAGCGC TGCGGGTTTA TCGCTGGCGT TTGCGGGTGA TTACCTGGCG
GCGTTCATCC ATGTACCACC TCACATTTCA GCCTTACTGT TCCTTCTCGT GATCGCGCTA
CTCAATGCGA GGGGAATTAA AGAATCCTTG GGAGCCAACT TGGTGATGAC AGTCATTGAG
CTGTCAGGCC TTCTTTTGGT CGTTGTTGCC GCCGCCTGGT ATTTCCGTAC AGGTGATGCA
GATTTGGGTC GCAGCCTGGA GTTCAAGCCG GGAGTCAGCC CGGTGTTAGC CGTTTTGGGG
GCGGCACTGA TCGCCTTCTA TTCTTTTGTA GGATTCGAAA CATCCGCCAA TCTTGCAGAA
GAAATTCGAG ACGTTCGAAA AGTCTACCCC CGCGCATTGT TTGGCGCATT GCTGACCGCC
GGAGTCCTCT ACATGGCGGT CGGTGTAGCT GCATCTTCCG TACTGCCCAT GGAAAAACTG
GTTGCAACCT CTGCTCCTCT TCTTGAGGTG GTTCGGGCGT CAGGTTTGAA CATCCCGCCT
CGCGTCTTTG CCTTTATTGC ATTGGTCGCG GTAGCCAACG GCGCACTTCT AACCATGATA
ATGGCCAGCC GCCTTACTTA TGGCATGGCC TGCCTTGGAC TTTTGCCGAA TGCCTTGAGC
AAAGTGCTGC CTCAACGACG CACCCCGTGG ATAGCAGTGA TCGCTACCAC CCTCGTAGCA
ATCGGGCTCA CGCTGACGGG GACGCTAGCC ACGCTCGCTG AAACGGTCGT CCTGCTCCTG
CTGTTCGTAT TTCTCAGTAC CAATTTGTCC GTGTTGATCC TGCGCCGTGA CGAGGTTGCG
CAAGATCATT TTCGAGTACC TACGTGGGTT CCGCTACTTG CTATCGTCTC GTGCCTGGTA
CTGCTTAGTC AGCAAAGTCT GGAAACCTGG ATGCGTGGAG GCGCGCTGAT CCTGACAGGC
ATGCTGCTTT TCGCCTGTGC AAGAGTGGCA CTGCCGGCGC CAGTGGAGCC TGGCTAG
 
Protein sequence
MMTLPSKTSL RRAVTGPMLF LFILGDVLGA GVYALAGTIA GEVGGAIWMP LLIALFFAML 
TAGSYAELVT KYPHAGAASV FAEKAFGSPL ISFLVGFCML SAAVTSAAGL SLAFAGDYLA
AFIHVPPHIS ALLFLLVIAL LNARGIKESL GANLVMTVIE LSGLLLVVVA AAWYFRTGDA
DLGRSLEFKP GVSPVLAVLG AALIAFYSFV GFETSANLAE EIRDVRKVYP RALFGALLTA
GVLYMAVGVA ASSVLPMEKL VATSAPLLEV VRASGLNIPP RVFAFIALVA VANGALLTMI
MASRLTYGMA CLGLLPNALS KVLPQRRTPW IAVIATTLVA IGLTLTGTLA TLAETVVLLL
LFVFLSTNLS VLILRRDEVA QDHFRVPTWV PLLAIVSCLV LLSQQSLETW MRGGALILTG
MLLFACARVA LPAPVEPG