| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2711 |
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| Symbol | |
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| ID | 3714406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3125645 |
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| End bp | 3126898 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_348442 |
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| Protein GI | 77458936 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.695739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.810589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCG GTCTCACCTG CGGCGCTGCC CTGCCCGCCC TTGCCGATAC CGATTCGAAC
GTATTTACCC GCAGCACCCT GACCGGCGAC TGGGGCGGCC TGCGCCACCA GTTCGACGAA
GACGGCATCA AGTTCACCGG TGATTACACC GGCGAAACCG CCTACAACGC CGACGGCGGC
CTGCATCGCT CGGCGCGTTA CTCGCAGAAC ATCAAGCTCG GTGCGCAGTT CGACCTGAGC
AAACTGTACG GCGTCGATAA CGCCGGCAAG ATTCAGCTGA CCATCAACGA TCGACGCGGC
AACAGTGCCT CCGAAGATCT GGTCGGCAAC CGTCTGCCGA TCCAGGAAAA CTACGGCGGC
CTCTACACCC GCCTGACCGA GCTGAGCTAC GAGCGCAGCC TGTTCACCCC GGCACTGAAC
GTCAAACTCG GCTACATGGC CATGGGCAAC GACCTCGGCG GCCTCGACAG CGGCATTCTC
TGCAACTTCA TGAACGCCGG TTTCTGCGGT CACCCGCTGA ACATGTCCGG TGGCAGTGGC
TGGACCAACT ACCCCAACGC CCACCTGGGT GTGCGGGTGA AATACGACCT CTCCCCGGCC
TGGCAACTGC GCGTGGCCGC GTTCAATGTC GATCCGGAAA GTAACGGCAA TTCCAGCCGT
GCCTGGCACT TGGGCCCGAA ACACACCACC GGCACCGTGG TGCCGATCGA GCTGGTCTAC
AAGCAGGCCG GCAAACTGCC CGGCGAGTAC AAGCTCGGGT ATTACTACGA CAGCTCCGAC
GTCAAACGCA TCGGCAGTGA CAAGGAAGTG TCCGGACGCG GCGGCCATTA CGTCCTGATC
GACCAGGCCG TGTGGGCTTC GGATGTCTCC GAAGGTCGCA GCCTGCACGC TTTCGGCCAA
TACTCGGCGG CCAGCGAAGC AGCTTCGCCG TTCAGCAAGT GGTACGGCAC CGGTCTGGTT
CTGTACAAGC CTTTCGAAGG CCGCCCGCGT GACACCGTGG CGCTGGGCTA TGGCCGCGCA
GTGCCGAACC CGCGCAGCCG CGATGTGCTG CAGGACACCG CCATGGCCAA TGGCGCCGCG
TTCCCCAATC TGGACAGCGC CGAGCAATTG ATCGAGCTCG GTTACGGCTA TCAGGCCACG
CCTTGGCTGA CGCTGCGCCC GAATGTGCAA TACATCATTG AACCAGGCGC GTTCTCCGGC
CAGGACATCG ACAATGCGTT GGTGTTTGGA TTGCAGGTGA AAGCCGCGCT CTGA
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| Protein sequence | MLFGLTCGAA LPALADTDSN VFTRSTLTGD WGGLRHQFDE DGIKFTGDYT GETAYNADGG
LHRSARYSQN IKLGAQFDLS KLYGVDNAGK IQLTINDRRG NSASEDLVGN RLPIQENYGG
LYTRLTELSY ERSLFTPALN VKLGYMAMGN DLGGLDSGIL CNFMNAGFCG HPLNMSGGSG
WTNYPNAHLG VRVKYDLSPA WQLRVAAFNV DPESNGNSSR AWHLGPKHTT GTVVPIELVY
KQAGKLPGEY KLGYYYDSSD VKRIGSDKEV SGRGGHYVLI DQAVWASDVS EGRSLHAFGQ
YSAASEAASP FSKWYGTGLV LYKPFEGRPR DTVALGYGRA VPNPRSRDVL QDTAMANGAA
FPNLDSAEQL IELGYGYQAT PWLTLRPNVQ YIIEPGAFSG QDIDNALVFG LQVKAAL
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