Gene Pfl01_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2570 
Symbol 
ID3714113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2946717 
End bp2947631 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_348301 
Protein GI77458795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA TGAATATCGC AACCGTTGAC CTCAACCTGC TGAAAGTCTT CGAAGCCCTG 
CATGAAGAGT CCAGTGCCAG CCGCGCGGCG TTGCGTCTGG GCGTGACCCA GTCGGCGGTC
AGCGCGGCTC TGCGTCGGTT GCGCGAGGTG TATGGCGATC AATTGTTCGT GCGTACCGGA
CGGGGTTTGG CCCCGACGCT CAAGGCAAAC CAGTTGAAAC CGGTGGTCAG CGATGCGCTG
AACAAATGTC GGCAAAGCCT GGCCATGGTC GACCCGACTG CCAATCACTA CGACGGACGC
TCGGTTACTG TGGGCCTCTC GGACGACTTC GAGATCGCTT ACGGGCGGCG GCTGATCGAG
GAAATCGCCC GCCGCGCGCC GAAACTGCGG CTGATCTTTC GCCAGACCCA CAGTCAGATC
GTCGCCCGGG CGCTGATGGA GCGCAGCATC GATCTGGCAA TCACCGCCGG CGGGTTCGCC
GAACGGCTGC TCAGCCGTCA GGTGTTGGGT GAAGGGGGTT ATGCGTGTCT GGTGGATCCG
GCGAGCCTGG CGTCGGGCCA GCAGCAGATC GATCTGGAGG AGTTCGTCAC TCGCGAGCAC
CTGCTGGTGT CGTCGGGCGG TTTTATCGGG ATCACCGATG AAGGGCTGGC AGCGCTGGGC
CGGACTCGCC GGGTCTGCGC CTCAACCACG CATTTCGCCG CGTTGCCGCA CCTGCTCAAG
GGCAGCGATG CGGTGGCGAC CATTCCGACC CACGCCGCGC AGGCCATTGC TTCAATGAGC
GGGCTGGCGC TGCTGCCCTG CCCGCTGGCG CTGCCGCGCT ACCCGATCGA ACTGGGCTGG
CGCACCAGCA CCCAGATCGA TCCGGTGGTA CTGACGGTGC GCGAAGCGAT AGGCGCCAGT
TTCAGAACTG AGTGA
 
Protein sequence
MSQMNIATVD LNLLKVFEAL HEESSASRAA LRLGVTQSAV SAALRRLREV YGDQLFVRTG 
RGLAPTLKAN QLKPVVSDAL NKCRQSLAMV DPTANHYDGR SVTVGLSDDF EIAYGRRLIE
EIARRAPKLR LIFRQTHSQI VARALMERSI DLAITAGGFA ERLLSRQVLG EGGYACLVDP
ASLASGQQQI DLEEFVTREH LLVSSGGFIG ITDEGLAALG RTRRVCASTT HFAALPHLLK
GSDAVATIPT HAAQAIASMS GLALLPCPLA LPRYPIELGW RTSTQIDPVV LTVREAIGAS
FRTE